Amphidinols are polyketide metabolites produced by marine dinoflagellates and are chiefly composed of a long linear chain with polyol groups and polyolefins. Two new homologues, amphidinols 20 (AM20, 1) and 21 (AM21, 2), were isolated from Amphidinium carterae collected in Korea. Their structures were elucidated by detailed NMR analyses as amphidinol 6-type compounds with remarkably long polyol chains. Amphidinol 21 (2) has the longest linear structure among the amphidinol homologues reported so far. The congeners, particularly amphidinol 21 (2), showed weaker activity in hemolysis and antifungal assays compared to known amphidinols.

The isolation and structural determination of new marine ladder-frame polyethers, brevisulcatic acids-1 (1) and -4 (2) are reported. Brevisulcatic acids were isolated from the dinoflagellate Karenia brevisulcata, which was identified as the causative species of a major red tide event in New Zealand in 1998. The ether ring composition and a β-hydroxy, γ-methylene valeric acid side chain of 1 and 2 are common, but 2 has a γ-lactone as the 5-membered A-ring while 1 is the seco acid analogue. Compound 2 has structural and bioactivity similarities to brevetoxin A.

A novel marine toxin, brevisulcenal-F (KBT-F, from karenia brevisulcata toxin) was isolated from the dinoflagellate Karenia brevisulcata. A red tide of K. brevisulcata in Wellington Harbour, New Zealand, in 1998 was extremely toxic to fish and marine invertebrates and also caused respiratory distress in harbor bystanders. An extract of K. brevisulcata showed potent mouse lethality and cytotoxicity, and laboratory cultures of K. brevisulcata produced a range of novel lipid-soluble toxins. A lipid soluble toxin, KBT-F, was isolated from bulk cultures by using various column chromatographies. Chemical investigations showed that KBT-F has the molecular formula C107H160O38 and a complex polycyclic ether nature. NMR and MS/MS analyses revealed the complete structure for KBT-F, which is characterized by a ladder-frame polyether scaffold, a 2-methylbut-2-enal terminus, and an unusual substituted dihydrofuran at the other terminus. The main section of the molecule has 17 contiguous 6- and 7-membered ether rings. The LD50 (mouse i.p.) for KBT-F was 0.032 mg/kg.

Yessotoxin is a ladder-frame polyether produced by the dinoflagellate Protoceratium reticulatum. Previous labeling experiments using 13C-acetate established the unique assembly of the carbon chain from intact and cleaved acetate units. The origins of ether and hydroxy oxygens in the molecule, which would yield further information regarding the assembly of the ladder-frame structure, have yet to be established. In this study, we describe the incorporation of 18O in one experiment where the dinoflagellate was cultured under 18O2 atmosphere and in a second where the culture media was supplemented with [18O2]acetate. Labeled yessotoxin obtained from these experiments was subjected to collision-induced dissociation tandem mass spectrometry to determine the positions of 18O-incorporation pattern in the molecule. Detailed analyses of product ions from the fragmentation processes led to the identification of 18O-labeled positions and the incorporation ratios. The data revealed that the ether oxygens were labeled from 18O2 and the hydroxy oxygen on C32 was derived from [18O2]acetate. These results support a proposed biosynthetic mechanism of marine ladder-frame polyethers that a polyene precursor was oxidized by a monooxygenase after acetate condensation.

The first and highly efficient total synthesis of (−)-brevisin has been achieved. The title compound was synthesized in only 29 steps (longest linear sequence) from commercially available starting materials. The synthesis provided over 70 mg of a marine polycyclic ether compound.

A polyoxy linear carbon chain compound, prorocentrol (1), was isolated from cultured cells of the dinoflagellate Prorocentrum hoffmannianum, which produces a polyether carboxylic acid, okadaic acid. The structure of 1 was elucidated by detailed analyses of 2D NMR spectra. Compound 1 possesses 30 hydroxy groups, 1 ketone, and 8 double bonds on the C65-linear carbon chain. Its partial relative configuration was deduced by the proton−proton and long-range carbon−proton coupling constants, and compound 1 showed moderate cytotoxicity and antidiatom activity.

A monocyclic ether alkaloid, brevisamide (1) was isolated from the dinoflagellate Karenia brevis that produces a variety of ladder-frame polyethers. Its proposed biosynthetic intermediate (2) comprising a linear backbone with an E-olefin functionality was synthesized for biosynthetic studies on the marine ladder-frame polyethers.A proposed biosynthetic intermediate of brevisamide comprising a linear backbone with an E-olefin functionality was synthesized for biosynthetic studies on the marine ladder-frame polyethers.

The first examples of highly selective deprotection of silyl ethers by DIBALH are reported. Its selectivity enabled us to remove a primary TBS group and a primary TBDPS group in the presence of a secondary TES group.

Synthesis of the BC/DE ring model of brevisin, a polycyclic ether isolated from the red tide dinoflagellate Karenia brevis, is reported. Comparison of the NMR data of the BC/DE ring model with those corresponding to the same region of brevisin led to the confirmation of its structure around the acyclic juncture.