R. Graham Cooks

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Name: Cooks, Graham
Organization: Purdue University , USA
Department: Department of Chemistry
Title: (PhD)

TOPICS

Co-reporter:H. Samuel Ewan, Kiran Iyer, Seok-Hee Hyun, Michael Wleklinski, R. Graham Cooks, and David H. Thompson
Organic Process Research & Development October 20, 2017 Volume 21(Issue 10) pp:1566-1566
Publication Date(Web):August 22, 2017
DOI:10.1021/acs.oprd.7b00218
Electrospray and Leidenfrost droplet accelerated reactions were used as a predictive tool for estimating the outcome of microfluidic synthesis as demonstrated by Wleklinski et al. Rapid analysis by electrospray-mass spectrometry (ESI-MS) also provided immediate feedback on reaction outcomes in flow reactions. Significant reaction acceleration was observed in electrospray relative to the corresponding bulk reaction. This rapid reaction screening and analysis method has allowed for the detection of previously unreported outcomes in the reaction between 5-chloro-2-(methylamino)benzophenone and haloacetyl chloride (halo = Cl or Br) in the continuous synthesis of diazepam. In our current study, a more detailed extension of the previous work, we report acceleration factors that are solvent dependent; additional byproducts that were observed on the microfluidic scale that were absent in the droplet reactions. Gaining insight from this combined droplet and microfluidic screening/rapid ESI-MS analysis approach, we have helped guide the synthesis of diazepam and showcased the potential of this method as a reaction optimization and discovery tool. Informed by these new insights, diazepam was synthesized in a high-yield two-step continuous flow process.
Co-reporter:Adam Hollerbach, Zane Baird, and R. Graham Cooks
Analytical Chemistry May 2, 2017 Volume 89(Issue 9) pp:5058-5058
Publication Date(Web):April 6, 2017
DOI:10.1021/acs.analchem.7b00469
The performance of a small, plastic drift tube ion mobility spectrometer (DT-IMS) is described. The IMS was manufactured using three-dimensional (3D) printing techniques and operates in the open air at ambient pressure, temperature, and humidity. The IMS housing and electrodes were printed from nonconductive polylactic acid (PLA, housing) and conductive polyethylene terephthalate glycol-modified polymer containing multiwalled carbon nanotubes (PETG-CNT, electrodes). Ring electrodes consisting of both an inner disk and an outer ring were used to prevent neutral transmission while maximizing ion transmission. As a stand-alone instrument, the 3D printed IMS is shown to achieve resolving powers of between 24 and 50 in positive ion mode using tetraalkylammonium bromide salts (TAA), benzylamines (mono-, di-, and tri-), and illicit drugs (MA, MDEA, and haloperidol). Resolving powers of between 29 and 42 were achieved in negative ion mode using sodium alkyl sulfates (C8, C12, C16, and C18). Reduced ion mobilities of TAA cations (C2–C8) were calculated at 14% relative humidity in air to be 1.36, 1.18, 1.03, 0.90, 0.80, 0.73, and 0.67, respectively. The effect of humidity on reduced ion mobilities of TAA cations is discussed. 3D printing is shown to be a quick and cost-effective way to produce small IMS instruments that can compete in performance with conventionally manufactured IMS instruments that also operate in the open air. An important difference between this IMS and other instruments is the absence of a counter gas flow.
Co-reporter:Dalton T. Snyder and R. Graham Cooks
Analytical Chemistry August 1, 2017 Volume 89(Issue 15) pp:8148-8148
Publication Date(Web):June 23, 2017
DOI:10.1021/acs.analchem.7b01963
In this follow-up paper to our previous work on single analyzer precursor ion scans in a linear quadrupole ion trap (Snyder, D. T.; Cooks, R. G. Single analyzer precursor ion scans in a linear quadrupole ion trap using orthogonal double resonance excitation. J. Am. Soc. Mass Spectrom. 2017, DOI: 10.1007/s13361-017-1707-y), we now report the development of single analyzer neutral loss scans in a linear quadrupole ion trap using orthogonal double resonance excitation. Methodologically, there are three key differences between single analyzer precursor ion scans and neutral loss scans under constant radiofrequency (rf) conditions: (1) in the latter experiment, both excitation and ejection frequencies must be scanned, whereas in the former the ejection frequency is fixed, (2) the need to maintain a constant neutral loss while incrementing both precursor and product ion masses, complicated by the complex relationship between secular frequency and mass, requires use of two simultaneous frequency scans, both linear in mass, and (3) because the ejection frequency is scanned, a third ac signal occurring between the ac excitation and ac ejection frequency scans must also be applied and scanned in order to reject artifact peaks caused by ejection of unfragmented precursor ions. Using this methodology, we demonstrate neutral loss scans on a commercial linear ion trap using mixtures of illicit drugs and acylcarnitines. We also demonstrate neutral loss scanning on a Populus deltoides leaf and on a lignin sample, both significantly more complex mixtures.
Co-reporter:Valentina Pirro;Raquel Sero Llor;Alan K. Jarmusch;Clint M. Alfaro;Aaron A. Cohen-Gadol;Eyas M. Hattab
Analyst (1876-Present) 2017 vol. 142(Issue 21) pp:4058-4066
Publication Date(Web):2017/10/23
DOI:10.1039/C7AN01334E
Touch spray mass spectrometry using medical swabs is an ambient ionization technique (ionization of unprocessed sample in the open air) that has potential intraoperative application in quickly identifying the disease state of tissue and in better characterizing the resection margin. To explore this potential, we studied 29 human brain tumor specimens and obtained evidence that this technique can provide diagnostic molecular information that is relevant to brain cancer. Touch spray using medical swabs involves the physical sampling of tissue using a medical swab on a spatial scale of a few mm2 with subsequent ionization occurring directly from the swab tip upon addition of solvent and application of a high voltage. Using a tertiary mixture of acetonitrile, N,N-dimethylformamide, and ethanol, membrane-derived phospholipids and oncometabolites are extracted from the tissue, incorporated into the sprayed microdroplets, vacuumed into the mass spectrometer, and characterized in the resulting mass spectra. The tumor cell load was assessed from the complex phospholipid pattern in the mass spectra and also separately by measurement of N-acetylaspartate. Mutation status of the isocitrate dehydrogenase gene was determined via detection of the oncometabolite 2-hydroxyglutarate. The lack of sample pretreatment makes touch spray mass spectrometry using medical swabs a feasible intraoperative strategy for rapid surgical assessment.
Co-reporter:Dalton T. Snyder;Desmond A. Kaplan;Ryan M. Danell;Friso H. W. van Amerom;Veronica T. Pinnick;William B. Brinckerhoff;Paul R. Mahaffy
Analyst (1876-Present) 2017 vol. 142(Issue 12) pp:2109-2117
Publication Date(Web):2017/06/12
DOI:10.1039/C7AN00664K
A limitation of conventional quadrupole ion trap scan modes which use rf amplitude control for mass scanning is that, in order to detect a subset of an ion population, the rest of the ion population must also be interrogated. That is, ions cannot be detected out of order; they must be detected in order of either increasing or decreasing mass-to-charge (m/z). However, an ion trap operated in the ac frequency scan mode, where the rf amplitude is kept constant and instead the ac frequency is used for mass-selective operations, has no such limitation because any variation in the ac frequency affects only the subset of ions whose secular frequencies match the perturbation frequency. Hence, an ion trap operated in the ac frequency scan mode can perform any arbitrary mass scan, as well as a sequence of scans, using a single ion injection; we demonstrate both capabilities here. Combining these two capabilities, we demonstrate the acquisition of a full mass spectrum, a product ion spectrum, and a second generation product ion spectrum using a single ion injection event. We further demonstrate a “segmented scan” in which different mass ranges are interrogated at different rf amplitudes in order to improve resolution over a portion of the mass range, and a “periodic scan” in which ions are continuously introduced into the ion trap to achieve a nearly 100% duty cycle. These unique scan modes, along with other characteristics of ac frequency scanning, are particularly appropriate for miniature ion trap mass spectrometers. Hence, implementation of ac frequency scanning on a prototype of the Mars Organic Molecule Analyzer mass spectrometer is also described.
Co-reporter:V. Pirro;A. K. Jarmusch;C. M. Alfaro;E. M. Hattab;A. A. Cohen-Gadol
Analyst (1876-Present) 2017 vol. 142(Issue 3) pp:449-454
Publication Date(Web):2017/01/26
DOI:10.1039/C6AN02645A
Analysis of neurological smears by desorption electrospray ionization mass spectrometry (DESI-MS) is an emerging diagnostic strategy for intraoperative consultation in brain tumor resection. DESI-MS allows rapid sampling while providing accurate diagnostic information. We assess the chemical homogeneity of neurological smears using DESI-MS imaging and the quality of rapid DESI-MS diagnosis.
Co-reporter:Pengyuan Liu;Pengyi Zhao;Hao Chen
Chemical Science (2010-Present) 2017 vol. 8(Issue 9) pp:6499-6507
Publication Date(Web):2017/08/21
DOI:10.1039/C7SC01999H
Ion dissociation is the usual basis for tandem MS analysis but a significant limitation is that only charged fragments from ion dissociation events are detected while neutral fragments are simply lost. This study reports our continued effort to solve this problem by developing atmospheric pressure neutral reionization mass spectrometry (APNR). In APNR, analyte ions are thermally dissociated (atmospheric pressure thermal dissociation, APTD) followed by soft reionization using electrosonic spray ionization (ESSI). Our results show that APNR is a powerful method for structural analysis of various biomolecules such as peptides, saccharides and nucleotides, as well as for elucidating unimolecular ion dissociation mechanisms. It was found that APNR provides extensive fragment ions including a series of y ions in peptides, which benefit sequencing and provide complementary information to collision induced dissociation (CID). In particular, direct cleavage of disulfide bonds of peptides occurs during APTD, facilitating peptide sequencing and disulfide bond mapping. In addition, many cross-ring cleavage fragments are detected during APNR analysis of oligosaccharides, indicating that the APTD dissociation process is energetic and potentially useful for identifying glycan linkage sites. Fragmentation patterns of oligosaccharide isomers can be used for their differentiation. Furthermore, in the cases of dissociation of nucleotides and synthetic naphthoylindole drugs, the putative neutral, phosphorylated riboses and indoles, were successfully detected using APNR, providing strong evidence to confirm previously proposed unimolecular ion dissociation mechanisms. We believe this APNR technique along with APTD should be of high value in structure determination of biomolecules.
Co-reporter:Dalton T. Snyder, Christopher J. Pulliam, R. Graham Cooks
International Journal of Mass Spectrometry 2017 Volume 422(Volume 422) pp:
Publication Date(Web):1 November 2017
DOI:10.1016/j.ijms.2016.10.022
•The inverse Mathieu q scan is implemented for the first time on a miniature mass spectrometer.•Mass range extension of 3.5× compared to resonance ejection is demonstrated for both benchtop and miniature instruments.•Unit resolution is shown in the case where space charge is controlled and the scan rate is lowered.The mass/charge range of a mass spectrometer operated in either the boundary or resonance ejection mode is usually limited by the highest radiofrequency (rf) voltage that can be attained, although lowering the resonance ejection Mathieu q value (qeject) can increase this range at the expense of resolution and unintended boundary ejection can result in spectral complexity. High voltage requirements are particularly troublesome for miniature instruments, which have tight electronic constraints and closely-spaced electrodes prone to discharging. Here we demonstrate an alternative approach to mass range extension based on a method of scanning the resonance ejection frequency nonlinearly in the form of an inverse Mathieu q scan. The results show an increase in mass range of up to 3.5 times on both a benchtop LTQ linear ion trap and the Mini 12 miniature linear ion trap mass spectrometer without instrumental modifications, and unit resolution is observed on the benchtop instrument by controlling the scan rate and minimizing space charge effects.
Co-reporter:Xin Li, Xin Yan, R. Graham Cooks
International Journal of Mass Spectrometry 2017 Volume 418(Volume 418) pp:
Publication Date(Web):1 July 2017
DOI:10.1016/j.ijms.2016.11.017
•Field-assisted nitrogen ion insertion is used for ionization of hydrocarbons.•Derivatization is integrated with desorption and ionization from condensed phase.•Generation of molecular ions of heavy alkanes at atmospheric pressure is efficient.Ionization using field-assisted nitrogen insertion facilitates mass spectrometric characterization of saturated hydrocarbons. The technique integrates in-situ derivatization of aliphatic hydrocarbons on a dry substrate with desorption and ionization of these condensed phase samples. Nitrogen reagent ions, including N3+ generated from a micro-discharge initiated in a nitrogen atmosphere (or in lab air), react with aliphatic hydrocarbons through atomic nitrogen ion incorporation to generate iminium ions. The method is efficient in generating molecular ions of saturated hydrocarbons, particularly those of higher molecular weight. This field-assisted nitrogenation method has been optimized by systematic variation of reagent gas flow rate, tube lens voltage, and sample placement. Independent optimization of analyte ionization allows coupling to any mass analyzer with an atmospheric pressure interface. Field-assisted nitrogen ion insertion is shown by mass analysis using a linear quadrupole ion trap or using an Orbitrap to generate [M+N]+ ions predominantly. This allows the identification of the elemental compositions of alkane constituents of complex petroleum-based products. In the presence of an oxidizing agent such as benzoquinone, dehydrogenation accompanies nitrogen ion insertion under atmospheric pressure and low temperature with minimal CC bond rupture. This study describes the optimization of this experiment, its application to branched alkanes, the relationship to paper spray ionization and the reaction mechanism including accompanying redox reactions. Data are shown for n-alkanes, branched alkyls and aryl substituted alkanes all of which are successfully ionized. Results are also given for a variety of other functional groups; these do not give N+-addition unless long alkyl chains form part of the molecular structure.Download high-res image (69KB)Download full-size image
Co-reporter:Dalton T. Snyder, R. Graham Cooks
International Journal of Mass Spectrometry 2017 Volume 417(Volume 417) pp:
Publication Date(Web):1 June 2017
DOI:10.1016/j.ijms.2017.05.001
•A method for optimizing the ac amplitude for quadrupole ion traps operated at fixed rf and using the inverse Mathieu q scan is presented.•Comparisons are made with a simpler alternative quadratic mass calibration procedure at constant ac amplitude.•Experimental results are compared to theoretical derivations.•Mass accuracy of 0.1 Da is demonstrated.Two theoretically equivalent methods of improving mass assignments in quadrupole ion traps operated using ac frequency scans are described side-by-side. Both use the inverse Mathieu q scan under constant rf conditions. In a first method, the ac amplitude is varied quadratically as a function of the Mathieu q parameter so as to force mass shifts to be constant with respect to ion m/z, thereby giving a precisely linear relationship between m/z and time. The average mass error improves by a factor of four when using the quadratic regression of ac amplitude vs. Mathieu q compared to constant ac amplitude conditions, assuming a linear mass calibration procedure. The quadratic relationship is also predicted by theory. In a second, simpler method, the ac signal amplitude is kept constant during the inverse Mathieu q scan and a quadratic relationship between m/z and time is used for mass calibration. Although the mass calibration is not linear in this case, the complicated amplitude optimization process is bypassed while retaining the same degree of mass accuracy. Importantly, in this case no parameter aside from the overall ac amplitude needs to be optimized, which is an advantage over the standard resonance ejection method in which the ac amplitude must be optimized for a given rf amplitude scan. Average mass error as low as 0.1 Da is shown to be possible in the two ac scan methods, which compares reasonably well with commercial resonance ejection data. This performance is adequate for ion traps used on planetary exploration missions and other in situ measurements, for which the ac frequency scanning method is particularly applicable.Download high-res image (80KB)Download full-size image
Co-reporter:Dalton T. Snyder
Journal of The American Society for Mass Spectrometry 2017 Volume 28( Issue 9) pp:1929-1938
Publication Date(Web):02 June 2017
DOI:10.1007/s13361-017-1707-y
Reported herein is a simple method of performing single analyzer precursor ion scans in a linear quadrupole ion trap using orthogonal double resonance excitation. A first supplementary AC signal applied to the y electrodes is scanned through ion secular frequencies in order to mass-selectively excite precursor ions while, simultaneously, a second fixed-frequency AC signal is applied orthogonally on the x electrodes in order to eject product ions of selected mass-to-charge ratios towards the detector. The two AC signals are applied orthogonally so as to preclude the possibility of (1) inadvertently ejecting precursor ions into the detector, which results in artifact peaks, and (2) prevent beat frequencies on the x electrodes from ejecting ions off-resonance. Precursor ion scans are implemented while using the inverse Mathieu q scan for easier mass calibration. The orthogonal double resonance experiment results in single ion trap precursor scans with far less intense artifact peaks than when both AC signals are applied to the same electrodes, paving the way for implementation of neutral loss scanning in single ion trap mass spectrometers.
Co-reporter:Caitlin E. Falcone;Zinia Jaman;Michael Wleklinski;Andy Koswara;David H. Thompson
Analyst (1876-Present) 2017 vol. 142(Issue 15) pp:2836-2845
Publication Date(Web):2017/07/24
DOI:10.1039/C7AN00622E
Preparative electrospray (ES) exploits the acceleration of reactions in charged microdroplets to perform a small scale chemical synthesis. In combination with on-line mass spectrometric (MS) analysis, it constitutes a rapid screening tool to select reagents to generate specific products. A successful reaction in preparative ES triggers a refined microfluidic reaction screening procedure which includes the optimization for stoichiometry, temperature and residence time. We apply this combined approach for refining a flow synthesis of atropine. A successful preparative ES pathway for the synthesis of the phenylacetyl ester intermediate, using tropine/HCl/phenylacetyl chloride, was optimized for solvent in both the preparative ES and microfluidics flow systems and a base screening was conducted by both methods to increase atropine yield, increase percentage conversion and reduce byproducts. In preparative ES, the first step yielded 55% conversion (judged using MS) to intermediate and the second step yielded 47% conversion to atropine. When combined in two discrete steps in continuous-flow microfluidics, a 44% conversion of the starting material and a 30% actual yield of atropine were achieved. When the reactions were continuously telescoped in a new form of preparative reactive extractive electrospray (EES), atropine was synthesized with a 24% conversion. The corresponding continuous-flow microfluidics experiment gave a 55% conversion with an average of 34% yield in 8 min residence time. This is the first in depth study to utilize telescoped preparative ES and the first use of dual ESI emitters for multistep synthesis.
Co-reporter:Bradley P. Loren;Michael Wleklinski;Andy Koswara;Kathryn Yammine;Yanyang Hu;Zoltan K. Nagy;David H. Thompson
Chemical Science (2010-Present) 2017 vol. 8(Issue 6) pp:4363-4370
Publication Date(Web):2017/05/30
DOI:10.1039/C7SC00905D
A highly integrated approach to the development of a process for the continuous synthesis and purification of diphenhydramine is reported. Mass spectrometry (MS) is utilized throughout the system for on-line reaction monitoring, off-line yield quantitation, and as a reaction screening module that exploits reaction acceleration in charged microdroplets for high throughput route screening. This effort has enabled the discovery and optimization of multiple routes to diphenhydramine in glass microreactors using MS as a process analytical tool (PAT). The ability to rapidly screen conditions in charged microdroplets was used to guide optimization of the process in a microfluidic reactor. A quantitative MS method was developed and used to measure the reaction kinetics. Integration of the continuous-flow reactor/on-line MS methodology with a miniaturized crystallization platform for continuous reaction monitoring and controlled crystallization of diphenhydramine was also achieved. Our findings suggest a robust approach for the continuous manufacture of pharmaceutical drug products, exemplified in the particular case of diphenhydramine, and optimized for efficiency and crystal size, and guided by real-time analytics to produce the agent in a form that is readily adapted to continuous synthesis.
Co-reporter:Xin Yan;Xin Li;Chengsen Zhang;Yang Xu
Journal of The American Society for Mass Spectrometry 2017 Volume 28( Issue 6) pp:1175-1181
Publication Date(Web):31 January 2017
DOI:10.1007/s13361-016-1591-x
A change in enzyme activity has been used as a clinical biomarker for diagnosis and is useful in evaluating patient prognosis. Current laboratory measurements of enzyme activity involve multi-step derivatization of the reaction products followed by quantitative analysis of these derivatives. This study simplified the reaction systems by using only the target enzymatic reaction and directly detecting its product. A protocol using paper spray mass spectrometry for identifying and quantifying the reaction product has been developed. Evaluation of the activity of aspartate aminotransferase (AST) was chosen as a proof-of-principle. The volume of sample needed is greatly reduced compared with the traditional method. Paper spray has a desalting effect that avoids sprayer clogging problems seen when examining serum samples by nanoESI. This very simple method does not require sample pretreatment and additional derivatization reactions, yet it gives high quality kinetic data, excellent limits of detection (60 ppb from serum), and coefficients of variation <10% in quantitation.
Co-reporter:Depanjan Sarkar;Maheswari Kavirajan Mahitha;Anirban Som;Anyin Li;Michael Wleklinski;Robert Graham Cooks;Thalappil Pradeep
Advanced Materials 2016 Volume 28( Issue 11) pp:2223-2228
Publication Date(Web):
DOI:10.1002/adma.201505127
Co-reporter:Dalton T. Snyder, Christopher J. Pulliam, Zheng Ouyang, and R. Graham Cooks
Analytical Chemistry 2016 Volume 88(Issue 1) pp:2
Publication Date(Web):September 30, 2015
DOI:10.1021/acs.analchem.5b03070
Co-reporter:Zane Baird, Valentina Pirro, Stephen Ayrton, Adam Hollerbach, Cathleen Hanau, Karen Marfurt, Mary Foltz, R. Graham Cooks, and Michael Pugia
Analytical Chemistry 2016 Volume 88(Issue 14) pp:6971
Publication Date(Web):June 28, 2016
DOI:10.1021/acs.analchem.6b02043
A method is presented for the detection of circulating tumor cells (CTC) using mass spectrometry (MS), through reporter-ion amplification. Particles functionalized with short-chain peptides are bound to cells through antibody–antigen interactions. Selective release and MS detection of peptides is shown to detect as few as 690 cells isolated from a 10 mL blood sample. Here we present proof-of-concept results that pave the way for further investigations.
Co-reporter:Dalton T. Snyder, Patrick W. Fedick, and R. Graham Cooks
Analytical Chemistry 2016 Volume 88(Issue 19) pp:9572
Publication Date(Web):September 13, 2016
DOI:10.1021/acs.analchem.6b02209
There are many cases in which limited information is obtained from a single stage of tandem mass spectrometry (MS2 or MS/MS). For example, isomeric cathinones give similar product ion MS2 spectra, but they can be differentiated by their unique MS3 fragments. Other drugs such as oxycodone and noroxycodone lose water in a single-stage tandem mass spectrometry experiment but give rich structural information in subsequent stages, as do many peptides. Here we utilize multigenerational collision-induced dissociation (CID) on a miniature mass spectrometer and emphasize useful applications. Unique fragmentation patterns consisting of several generations of fragment ions are obtained in these multigenerational spectra, allowing discrimination of cathinone isomers and structural characterization of small molecules, including drugs and peptides, all using a single sequence of ion injection, isolation, and mass scanning.
Co-reporter:Ryan M. Bain, Xin Yan, Shannon A. Raab, Stephen T. Ayrton, Tawnya G. Flick and R. Graham Cooks  
Analyst 2016 vol. 141(Issue 8) pp:2441-2446
Publication Date(Web):10 Mar 2016
DOI:10.1039/C6AN00100A
Chiral analysis of constituents in solution-phase reaction mixtures can be performed by tandem mass spectrometry using the kinetic method to determine the enantiomeric excess (ee). Simply diluting an aliquot of a reaction mixture, adjusting the pH, and adding reagents necessary to form a chiral cluster ion allows chiral analysis. The product of a stereospecific N-selective alkylation reaction, 2-(3-(2-methoxyethoxy)-5-oxo-1,6-naphthyridin-6(5H)-yl)propanoic acid, was monitored for ee during the course of reaction, and it showed the expected inversion without ee erosion. Base-catalyzed racemization of the reaction product showed the expected decrease in ee as the reaction proceeded. The base-catalyzed racemization of ibuprofen was monitored on-line, providing near real-time data on ee.
Co-reporter:Christopher J. Pulliam, Pu Wei, Dalton T. Snyder, Xiao Wang, Zheng Ouyang, Rafal M. Pielak and R. Graham Cooks  
Analyst 2016 vol. 141(Issue 5) pp:1633-1636
Publication Date(Web):04 Feb 2016
DOI:10.1039/C5AN02575C
Bacteria colonies were analyzed using paper spray ionization coupled with a portable mass spectrometer. The spectra were averaged and processed using multivariate analysis to discriminate between different species of bacteria based on their unique phospholipid profiles. Full scan mass spectra and product ion MS/MS data were compared to those recorded using a benchtop linear ion trap mass spectrometer.
Co-reporter:Xin Yan, Ryan M. Bain, Yafeng Li, Ran Qiu, Tawnya G. Flick, and R. Graham Cooks
Organic Process Research & Development 2016 Volume 20(Issue 5) pp:940-947
Publication Date(Web):April 12, 2016
DOI:10.1021/acs.oprd.6b00039
Inductive electrospray ionization (iESI) is an ambient ionization method that is particularly well-suited to online reaction monitoring. It allows the potential of electrospray mass spectrometry (MS) to be realized as a routine process analytical technology (PAT) tool to monitor practical synthetic reactions in real time. In this study, a synthetic route to Anagliptin (target API) was successfully monitored using online iESI-MS. Starting materials not seen by traditional reaction monitoring tools (HPLC-UV/Vis and GC-FID) were observed, as well as water-sensitive reagents and intermediates which cannot easily be followed by other methods. Online tandem mass spectrometry (MS/MS) was used to characterize chemical species in the reaction mixture. Impurities and byproducts were identified, and information on the progress of byproduct formation enabled implementation of strategies to eliminate these byproducts in the course of the reaction. This work demonstrates how iESI-MS can be employed to obtain comprehensive information and solutions to some practical problems that occur in small-molecule synthetic reaction monitoring.
Co-reporter:Pu Wei, Soumabha Bag, Christopher J. Pulliam, Dalton T. Snyder, Rafal M. Pielak and R. Graham Cooks  
Analytical Methods 2016 vol. 8(Issue 8) pp:1770-1773
Publication Date(Web):09 Feb 2016
DOI:10.1039/C6AY00063K
The application of zero volt paper spray to the discrimination between species of bacteria is demonstrated here. While absolute signal intensities of representative lipids from bacterial membranes were three orders of magnitude lower than for conventional paper spray performed at high potential (kilovolts), the significant reduction in noise offset this disadvantage, resulting in clear separation in principal component analysis space between Gram positive and Gram negative bacteria as well as excellent separation between bacteria species.
Co-reporter:Ryan M. Bain; Christopher J. Pulliam; Shannon A. Raab
Journal of Chemical Education 2016 Volume 93(Issue 2) pp:340-344
Publication Date(Web):December 17, 2015
DOI:10.1021/acs.jchemed.5b00263
In this laboratory, students perform a synthetic reaction in two ways: (i) by traditional bulk-phase reaction and (ii) in the course of reactive paper spray ionization. Mass spectrometry (MS) is used both as an analytical method and a means of accelerating organic syntheses. The main focus of this laboratory exercise is that the same ionization source can be operated to perform chemical analysis or to accelerate synthesis. More specifically, students explore the effect on reaction progress of operating in one of two modes of paper spray ionization. The modes relate to droplet size that changes as the solvent is depleted from the paper over time. The online mass spectral data for the two modes allow students to see the differences that small changes to spray conditions can have on the MS of a reaction mixture, allowing transition from traditional analysis to accelerated chemical synthesis by simply allowing the paper to partially dry. Chemical analysis and accelerated synthesis can be performed sequentially in one simple, 2 min paper spray experiment with the haloform oxidation.
Co-reporter:Yafeng Li;Xin Yan; R. Graham Cooks
Angewandte Chemie International Edition 2016 Volume 55( Issue 10) pp:3433-3437
Publication Date(Web):
DOI:10.1002/anie.201511352

Abstract

Based on a study of competitive substituent effects in a Claisen–Schmidt reaction, interfacial effects have been shown to play an important role in accelerated reactions that occur in thin films and droplets. A role for the interface in an accelerated C−C bond-formation reaction between 6hydroxy-1-indanone and aromatic aldehydes is indicated by cooperative interactions between p-methylbenzaldehyde and p-nitrobenzaldehyde. Additional acceleration over that occurring in bulk reactions is seen for p-methylbenzaldehyde, but only in the presence of p-nitrobenzaldehyde. A decrease in the degree of acceleration is detected when the reaction is forced electrostatically to occur inside the thin film, and the interface is shown to participate in the accelerated reactions. This experimental evidence for interfacial thin film and droplet acceleration supports a recent model and builds on earlier work which locates molecules within evaporating droplets in electrosprays.

Co-reporter:Yafeng Li;Xin Yan; R. Graham Cooks
Angewandte Chemie 2016 Volume 128( Issue 10) pp:3494-3498
Publication Date(Web):
DOI:10.1002/ange.201511352

Abstract

Based on a study of competitive substituent effects in a Claisen–Schmidt reaction, interfacial effects have been shown to play an important role in accelerated reactions that occur in thin films and droplets. A role for the interface in an accelerated C−C bond-formation reaction between 6hydroxy-1-indanone and aromatic aldehydes is indicated by cooperative interactions between p-methylbenzaldehyde and p-nitrobenzaldehyde. Additional acceleration over that occurring in bulk reactions is seen for p-methylbenzaldehyde, but only in the presence of p-nitrobenzaldehyde. A decrease in the degree of acceleration is detected when the reaction is forced electrostatically to occur inside the thin film, and the interface is shown to participate in the accelerated reactions. This experimental evidence for interfacial thin film and droplet acceleration supports a recent model and builds on earlier work which locates molecules within evaporating droplets in electrosprays.

Co-reporter:Graham Cooks
Journal of The American Society for Mass Spectrometry 2016 Volume 27( Issue 4) pp:561-562
Publication Date(Web):2016 April
DOI:10.1007/s13361-016-1337-9
Co-reporter:Dalton T. Snyder
Journal of The American Society for Mass Spectrometry 2016 Volume 27( Issue 12) pp:1906-1913
Publication Date(Web):2016 December
DOI:10.1007/s13361-016-1494-x
Ion isolation in a linear ion trap is demonstrated using dual resonance frequencies, which are applied simultaneously. One frequency is used to eject ions of a broad m/z range higher in m/z than the target ion, and the second frequency is set to eject a range of ions lower in m/z. The combination of the two thus results in ion isolation. Despite the simplicity of the method, even ions of low intensity may be isolated since signal attenuation is less than an order of magnitude in most cases. The performance of dual frequency isolation is demonstrated by isolating individual isotopes of brominated compounds.
Co-reporter:Dalton T. Snyder
Journal of The American Society for Mass Spectrometry 2016 Volume 27( Issue 12) pp:1914-1921
Publication Date(Web):2016 December
DOI:10.1007/s13361-016-1493-y
A method of fragmenting ions over a wide range of m/z values while balancing energy deposition into the precursor ion and available product ion mass range is demonstrated. In the method, which we refer to as “multigenerational collision-induced dissociation”, the radiofrequency (rf) amplitude is first increased to bring the lowest m/z of the precursor ion of interest to just below the boundary of the Mathieu stability diagram (q = 0.908). A supplementary AC signal at a fixed Mathieu q in the range 0.2–0.35 (chosen to balance precursor ion potential well depth with available product ion mass range) is then used for ion excitation as the rf amplitude is scanned downward, thus fragmenting the precursor ion population from high to low m/z. The method is shown to generate high intensities of product ions compared with other broadband CID methods while retaining low mass ions during the fragmentation step, resulting in extensive fragment ion coverage for various components of complex mixtures. Because ions are fragmented from high to low m/z, space charge effects are minimized and multiple discrete generations of product ions are produced, thereby giving rise to “multigenerational” product ion mass spectra.
Co-reporter:Dalton T. Snyder
Journal of The American Society for Mass Spectrometry 2016 Volume 27( Issue 12) pp:1922-1928
Publication Date(Web):2016 December
DOI:10.1007/s13361-016-1473-2
The use of successive resonances for ion ejection is demonstrated here as a method of scanning quadrupole ion traps with improvement in both resolution and sensitivity compared with single frequency resonance ejection. The conventional single frequency resonance ejection waveform is replaced with a dual-frequency waveform. The two included frequencies are spaced very closely and their relative amplitudes are adjusted so that the first frequency that ions encounter excites them to higher amplitudes where space charge effects are less prominent, thereby giving faster and more efficient ejection when the ions come into resonance with the second frequency. The method is applicable at any arbitrary frequency, unlike double and triple resonance methods. However, like double and triple resonance ejection, ejection using successive resonances requires the rf and AC waveforms to be phase-locked in order to retain mass accuracy and mass precision. The improved performance is seen in mass spectra acquired by rf amplitude scans (resonance ejection) as well as by secular frequency scans.
Co-reporter:Valentina Pirro;Alan K. Jarmusch;Eyas M. Hattab;Zane Baird;Aaron A. Cohen-Gadol
PNAS 2016 Volume 113 (Issue 6 ) pp:1486-1491
Publication Date(Web):2016-02-09
DOI:10.1073/pnas.1523306113
Examination of tissue sections using desorption electrospray ionization (DESI)-MS revealed phospholipid-derived signals that differ between gray matter, white matter, gliomas, meningiomas, and pituitary tumors, allowing their ready discrimination by multivariate statistics. A set of lower mass signals, some corresponding to oncometabolites, including 2-hydroxyglutaric acid and N-acetyl-aspartic acid, was also observed in the DESI mass spectra, and these data further assisted in discrimination between brain parenchyma and gliomas. The combined information from the lipid and metabolite MS profiles recorded by DESI-MS and explored using multivariate statistics allowed successful differentiation of gray matter (n = 223), white matter (n = 66), gliomas (n = 158), meningiomas (n = 111), and pituitary tumors (n = 154) from 58 patients. A linear discriminant model used to distinguish brain parenchyma and gliomas yielded an overall sensitivity of 97.4% and a specificity of 98.5%. Furthermore, a discriminant model was created for tumor types (i.e., glioma, meningioma, and pituitary), which were discriminated with an overall sensitivity of 99.4% and a specificity of 99.7%. Unsupervised multivariate statistics were used to explore the chemical differences between anatomical regions of brain parenchyma and secondary infiltration. Infiltration of gliomas into normal tissue can be detected by DESI-MS. One hurdle to implementation of DESI-MS intraoperatively is the need for tissue freezing and sectioning, which we address by analyzing smeared biopsy tissue. Tissue smears are shown to give the same chemical information as tissue sections, eliminating the need for sectioning before MS analysis. These results lay the foundation for implementation of intraoperative DESI-MS evaluation of tissue smears for rapid diagnosis.
Co-reporter:Dalton T. Snyder;Christopher J. Pulliam
Journal of The American Society for Mass Spectrometry 2016 Volume 27( Issue 7) pp:1243-1255
Publication Date(Web):2016/07/01
DOI:10.1007/s13361-016-1377-1
Co-reporter:Ryan M. Bain, Christopher J. Pulliam and R. Graham Cooks  
Chemical Science 2015 vol. 6(Issue 1) pp:397-401
Publication Date(Web):09 Sep 2014
DOI:10.1039/C4SC02436B
Complex chemical reactions can occur in electrosprayed droplets on the millisecond time scale. The Hantzsch synthesis of 1,4-dihydropyridines was studied in this way using on-line mass spectral analysis to optimize conditions and characterize the product mixture. Changing the distance between the nanospray source and the MS inlet allowed exploration of reaction progress as a function of droplet time-of-flight. Desolvation of the charged microdroplets is associated with transformation from starting material to intermediates and eventually to product as the distance is increased. Results of the on-line experiments require a termination step that discontinuously completes the desolvation process and allows the generated gaseous ions to be used to characterize the state of the system at a particular time. The intermediates seen correspond to those known to occur in the bulk solution-phase reaction. Off-line collection of the sprayed reaction mixture allowed the recovery of 250 mg h−1 of desired reaction product from a single sprayer, permitting characterization by NMR and other standard methods. A thin film version of the accelerated reaction is described and it could be controlled through the temperature of the collection surface.
Co-reporter:Fred P. M. Jjunju, Simon Maher, Anyin Li, Sarfaraz U. Syed, Barry Smith, Ron M. A. Heeren, Stephen Taylor, and R. Graham Cooks
Analytical Chemistry 2015 Volume 87(Issue 19) pp:10047
Publication Date(Web):September 2, 2015
DOI:10.1021/acs.analchem.5b02684
A novel, lightweight (0.6 kg), solvent- and gas-cylinder-free, hand-held ion source based on desorption atmospheric pressure chemical ionization has been developed and deployed for the analysis of nitroaromatic explosives on surfaces in open air, offering portability for in-field analysis. A small, inexpensive, rechargeable lithium polymer battery was used to power the custom-designed circuitry within the device, which generates up to ±5 kV dc voltage to ignite a corona discharge plasma in air for up to 12 h of continuous operation, and allowing positive- and negative-ion mass spectrometry. The generated plasma is pneumatically transported to the surface to be interrogated by ambient air at a rate of 1–3.5 L/min, compressed using a small on-board diaphragm pump. The plasma source allows liquid or solid samples to be examined almost instantaneously without any sample preparation in the open environment. The advantages of low carrier gas and low power consumption (<6 W), as well as zero solvent usage, have aided in developing the field-ready, hand-held device for trigger-based, “near-real-time” sampling/ionization. Individual nitroaromatic explosives (such as 2,4,6-trinitrotoluene) can be easily detected in amounts as low as 5.8 pg with a linear dynamic range of at least 10 (10–100 pg), a relative standard deviation of ca. 7%, and an R2 value of 0.9986. Direct detection of several nitroaromatic compounds in a complex mixture without prior sample preparation is demonstrated, and their identities are confirmed by tandem mass spectrometry fragmentation patterns.
Co-reporter:Michael Wleklinski, Yafeng Li, Soumabha Bag, Depanjan Sarkar, Rahul Narayanan, T. Pradeep, and R. Graham Cooks
Analytical Chemistry 2015 Volume 87(Issue 13) pp:6786
Publication Date(Web):May 29, 2015
DOI:10.1021/acs.analchem.5b01225
The analytical performance and a suggested mechanism for zero volt paper spray using chromatography paper are presented. A spray is generated by the action of the pneumatic force of the mass spectrometer (MS) vacuum at the inlet. Positive and negative ion signals are observed, and comparisons are made with standard kV paper spray (PS) ionization and nanoelectrospray ionization (nESI). While the range of analytes to which zero volt PS is applicable is very similar to kV PS and nESI, differences in the mass spectra of mixtures are interpreted in terms of the more significant effects of analyte surface activity in the gentler zero volt experiment than in the other methods due to the significantly lower charge. The signal intensity of zero volt PS is also lower than in the other methods. A Monte Carlo simulation based on statistical fluctuation of positive and negative ions in solution has been implemented to explain the production of ions from initially uncharged droplets. Uncharged droplets first break up due to aerodynamics forces until they are in the 2–4 μm size range and then undergo Coulombic fission. A model involving statistical charge fluctuations in both phases predicts detection limits similar to those observed experimentally and explains the effects of binary mixture components on relative ionization efficiencies. The proposed mechanism may also play a role in ionization by other voltage-free methods.
Co-reporter:Rahul Narayanan, Depanjan Sarkar, Anirban Som, Michael Wleklinski, R. Graham Cooks, and Thalappil Pradeep
Analytical Chemistry 2015 Volume 87(Issue 21) pp:10792
Publication Date(Web):October 11, 2015
DOI:10.1021/acs.analchem.5b01596
Ionization of molecular species from one-dimensional (1D) tellurium nanowires (Te NWs) has been achieved at 1 V. Molecules with a range of chemical functional groups gave quality mass spectra with high signal/noise ratios and no fragment ions. Experiments suggest the possibility of emission of microdroplets of solution due to the intense fields at the ends or interfaces of nanostructures. It appears that electrolytic conduction of the solution wetting of the nanostructures and not the electronic conduction of the nanostructures themselves is involved in the ionization event. Anisotropy was seen when two-dimensionally aligned Te NWs were used for ionization. The orientation effect of aligned Te NWs on molecular ion intensity is demonstrated for many analytes including organic molecules and amino acids with experiments done using a silicon substrate having aligned Te NWs. These measurements suggest the possibility of creating a MS source that extends the applicability of mass spectrometry. Analysis of a variety of analytes, including amino acids, pesticides, and drugs, in pure form and in complex mixtures, is reported. These experiments suggest that 1D nanostructures in general could be excellent ionization sources.
Co-reporter:Valentina Pirro, Alan K. Jarmusch, Marco Vincenti, R. Graham Cooks
Analytica Chimica Acta 2015 Volume 861() pp:47-54
Publication Date(Web):25 February 2015
DOI:10.1016/j.aca.2015.01.008
•Direct oral fluid analysis for drug investigation at point-of-care.•Deployment of medical swabs as sampling device and means of MS ionization.•Qualitative detection of traditional drugs of abuse at the ng mL−1 level.•MS3 sequential product scans to confirm drug identification.Fourteen common drugs of abuse were identified in spiked oral fluid (ng mL−1 levels), analyzed directly from medical swabs using touch spray mass spectrometry (TS-MS), exemplifying a rapid test for drug detection. Multiple stages of mass analysis (MS2 and MS3) provided identification and detection limits sought by international forensic and toxicological societies, Δ9-THC and buprenorphine excluded. The measurements were made using a medical swab as both the sampling probe and means of ionization. The adaptation of medical swabs for TS-MS analysis allows non-invasive and direct sampling of neat oral fluid. Data acquisition was rapid, seconds per drug, and MS3 ensured reliable identification of illicit drugs. The reported data were acquired to investigate (i) ionization of common drugs from commercial swabs, (ii) ion intensity over spray duration, and (iii) dynamic range, all as initial steps in development of a quantitative method. The approach outlined is intended for point-of-care drug testing using oral fluid in clinical applications as well as in situ settings, viz. in forensic applications. The proof-of-concept results presented will require extension to other controlled substances and refinement in analytical procedures to meet clinical/legal requirements.
Co-reporter:Michael Wleklinski, Depanjan Sarkar, Adam Hollerbach, Thalappil Pradeep and R. Graham Cooks  
Physical Chemistry Chemical Physics 2015 vol. 17(Issue 28) pp:18364-18373
Publication Date(Web):15 Jun 2015
DOI:10.1039/C5CP01538C
Electrospray ionization of metal salt solutions followed by ambient heating transforms the resulting salt clusters into new species, primarily naked ionic metal clusters. The experiment is done by passing the clusters through a heated coiled loop outside the mass spectrometer which releases the counter-anion while generating the anionic or cationic naked metal cluster. The nature of the anion in the starting salt determines the type of metal cluster observed. For example, silver acetate upon heating generates only positive silver clusters, Agn+, but silver fluoride generates both positive and negative silver clusters, Agn+/− (3 < n < 20). Both unheated and heated metal salt sprays yield ions with characteristic geometric and electronic magic numbers. There is also a strong odd/even effect in the cationic and anionic silver clusters. Thermochemical control is suggested as the basis for favored formation of the observed clusters, with anhydride elimination occurring from the acetates and fluorine elimination from the fluorides to give cationic and anionic clusters, respectively. Data on the intermediates observed as the temperature is ramped support this. The naked metal clusters react with gaseous reagents in the open air, including methyl substituted pyridines, hydrocarbons, common organic solvents, ozone, ethylene, and propylene. Argentation of hydrocarbons, including saturated hydrocarbons, is shown to occur and serves as a useful analytical ionization method. The new cluster formation methodology allows investigation of ligand–metal binding including in reactions of industrial importance, such as olefin epoxidation. These reactions provide insight into the physicochemical properties of silver cluster anions and cations. The potential use of the ion source in ion soft landing is demonstrated by reproducing the mass spectra of salts heated in air using a custom surface science instrument.
Co-reporter:K. S. Kerian, A. K. Jarmusch, V. Pirro, M. O. Koch, T. A. Masterson, L. Cheng and R. G. Cooks  
Analyst 2015 vol. 140(Issue 4) pp:1090-1098
Publication Date(Web):09 Dec 2014
DOI:10.1039/C4AN02039A
Radical prostatectomy is a common treatment option for prostate cancer before it has spread beyond the prostate. Examination for surgical margins is performed post-operatively with positive margins reported to occur in 6.5–32% of cases. Rapid identification of cancerous tissue during surgery could improve surgical resection. Desorption electrospray ionization (DESI) is an ambient ionization method which produces mass spectra dominated by lipid signals directly from prostate tissue. With the use of multivariate statistics, these mass spectra can be used to differentiate cancerous and normal tissue. The method was applied to 100 samples from 12 human patients to create a training set of MS data. The quality of the discrimination achieved was evaluated using principal component analysis – linear discriminant analysis (PCA-LDA) and confirmed by histopathology. Cross validation (PCA-LDA) showed >95% accuracy. An even faster and more convenient method, touch spray (TS) mass spectrometry, not previously tested to differentiate diseased tissue, was also evaluated by building a similar MS data base characteristic of tumor and normal tissue. An independent set of 70 non-targeted biopsies from six patients was then used to record lipid profile data resulting in 110 data points for an evaluation dataset for TS-MS. This method gave prediction success rates measured against histopathology of 93%. These results suggest that DESI and TS could be useful in differentiating tumor and normal prostate tissue at surgical margins and that these methods should be evaluated intra-operatively.
Co-reporter:Alan K. Jarmusch, Kevin S. Kerian, Valentina Pirro, Tyler Peat, Craig A. Thompson, José A. Ramos-Vara, Michael O. Childress and R. Graham Cooks  
Analyst 2015 vol. 140(Issue 18) pp:6321-6329
Publication Date(Web):27 Jul 2015
DOI:10.1039/C5AN00825E
Canine non-Hodgkin's lymphoma (NHL) is a heterogeneous group of cancers representing approximately 15% of all canine cancers. Further, canine NHL mimics human disease in regards to histopathology and clinical behavior and could function as a comparative model. Diagnosis is currently performed by histopathological evaluation of surgical biopsy specimens and fine needle aspirate (FNA) cytology, an alternative and less invasive method for diagnosis. Desorption electrospray ionization – mass spectrometry (DESI-MS) imaging was performed on tissue sections of surgical biopsies and FNA smears. Mass spectra acquired from normal lymph nodes and NHL tumors were explored using multivariate statistics (e.g. principal component analysis). Tissue sections yielded a predicted sensitivity of 100% for normal and 93.1% for tumor. Further, preliminary results suggest B-cell and T-cell lymphoma can be discriminated (CV sensitivity of 95.5% and 85.7%, respectively). Normal and B-cell NHL FNA samples analyzed by DESI produced spectra that were similar to spectra obtained from surgical biopsies. FNA samples were evaluated using a PCA-LDA classification system built using tissue section data, exploring if the chemical information obtained from the different sample types is similar and whether DESI-MS performed on FNA samples is of diagnostic value. FNA prediction rate for normal (85.7%) and B-cell NHL (89.3%) indicated that DESI-MS analysis of FNA, not previously explored, could provide rapid preliminary diagnosis. Certainly, MS provides complementary molecular information to be used in conjunction with histopathology/cytology, potentially improving diagnostic confidence. The methodology outlined here is applicable to canine NHL, further supports canine models of human NHL, and translation to humans is envisioned.
Co-reporter:Ryan M. Bain; Christopher J. Pulliam; Shannon A. Raab
Journal of Chemical Education 2015 Volume 92(Issue 12) pp:2146-2151
Publication Date(Web):September 21, 2015
DOI:10.1021/acs.jchemed.5b00165
In this laboratory experiment, students learn how to use ESI to accelerate chemical synthesis and to couple it with on-line mass spectrometry for structural analysis. The Hantzsch synthesis of symmetric 1,4-dihydropyridines is a classic example of a one-pot reaction in which multiple intermediates can serve to indicate the progress of the reaction as a function of the electrospray variable parameters. This reaction allows students to gauge the effects of the spray variables while observing the enhanced reaction rate through product analysis in the charged microdroplets. Soft ionization techniques used in conjunction with collision-induced dissociation provide students experience with full scan MS to infer reaction progress and collision-induced fragmentation patterns for structural analysis. The experiment as a whole combines the physical phenomena of electrospray, Hantzsch chemical reactivity, and analytical measurements involving use of an ion trap mass spectrometer.
Co-reporter:Pengyuan Liu;Dr. R. Graham Cooks;Dr. Hao Chen
Angewandte Chemie International Edition 2015 Volume 54( Issue 5) pp:1547-1550
Publication Date(Web):
DOI:10.1002/anie.201410250

Abstract

Tandem mass spectrometry (MS/MS) is powerful for chemical identification but it is still insufficient for explicit ion structure determination. A strategy is introduced to elucidate MS fragment ion structures using NMR spectroscopy for the first time. In our experiments, precursor ions are dissociated at atmospheric pressure and the resulting fragment ions are identified by mass spectrometry but collected outside the mass spectrometer, making the subsequent NMR measurements possible. This new strategy has been applied to determine the chemical structure of the characteristic b2 fragment ion, a subject of longstanding debate in MS-based proteomics.

Co-reporter:Soumabha Bag, P.I. Hendricks, J.C. Reynolds, R.G. Cooks
Analytica Chimica Acta 2015 860() pp: 37-42
Publication Date(Web):
DOI:10.1016/j.aca.2015.01.007
Co-reporter:Pengyuan Liu;Dr. R. Graham Cooks;Dr. Hao Chen
Angewandte Chemie 2015 Volume 127( Issue 5) pp:1567-1570
Publication Date(Web):
DOI:10.1002/ange.201410250

Abstract

Tandem mass spectrometry (MS/MS) is powerful for chemical identification but it is still insufficient for explicit ion structure determination. A strategy is introduced to elucidate MS fragment ion structures using NMR spectroscopy for the first time. In our experiments, precursor ions are dissociated at atmospheric pressure and the resulting fragment ions are identified by mass spectrometry but collected outside the mass spectrometer, making the subsequent NMR measurements possible. This new strategy has been applied to determine the chemical structure of the characteristic b2 fragment ion, a subject of longstanding debate in MS-based proteomics.

Co-reporter:Christopher J. Pulliam;Ryan M. Bain
Journal of The American Society for Mass Spectrometry 2015 Volume 26( Issue 2) pp:224-230
Publication Date(Web):2015 February
DOI:10.1007/s13361-014-1056-z
Identification of active components in a variety of chemical products used directly by consumers is described at both trace and bulk levels using mass spectrometry. The combination of external ambient ionization with a portable mass spectrometer capable of tandem mass spectrometry provides high chemical specificity and sensitivity as well as allowing on-site monitoring. These experiments were done using a custom-built portable ion trap mass spectrometer in combination with the ambient ionization methods of paper spray, leaf spray, and low temperature plasma ionization. Bactericides, garden chemicals, air fresheners, and other products were examined. Herbicide applied to suburban lawns was detected in situ on single leaves 5 d after application.
Co-reporter:Fred P. M. Jjunju;Simon Maher;Anyin Li
Journal of The American Society for Mass Spectrometry 2015 Volume 26( Issue 2) pp:271-280
Publication Date(Web):2015 February
DOI:10.1007/s13361-014-1029-2
Desorption atmospheric pressure chemical ionization (DAPCI) is implemented on a portable mass spectrometer and applied to the direct detection of polycyclic aromatic hydrocarbons (PAHs) and alkyl substituted benzenes. The presence of these compounds in the environment poses a significant threat to the health of both humans and wildlife because of their carcinogenic, toxic, and mutagenic properties. As such, instant detection outside of the laboratory is of particular importance to allow in-situ measurement at the source. Using a rapid, high throughput, miniature, handheld mass spectrometer, several alkyl substituted benzenes and PAHs (i.e., 1,2,3,5-tetramethylbenzene, pentamethylbenzene, hexamethylbenzene, fluoranthene, anthracene, benzo[k]fluoranthene, dibenz[a,h]anthracene, acenaphthene, indeno[1,2,3-c,d]pyrene, 9-ethylfluorene, and 1-benzyl-3-methyl-naphthalene) were identified and characterized using tandem mass spectrometry (MS/MS) from ambient surfaces, in the open air. This method can provide almost instantaneous information while minimizing sample preparation, which is advantageous in terms of both cost and simplicity of analysis. This MS-based technique is applicable to a wide range of environmental organic molecules.
Co-reporter:R. Graham Cooks;Alan K. Jarmusch;Christina R. Ferreira;Valentina Pirro
PNAS 2015 Volume 112 (Issue 17 ) pp:5261-5262
Publication Date(Web):2015-04-28
DOI:10.1073/pnas.1505313112
Co-reporter:Alan K. Jarmusch and R. Graham Cooks  
Natural Product Reports 2014 vol. 31(Issue 6) pp:730-738
Publication Date(Web):03 Apr 2014
DOI:10.1039/C3NP70121B
Covering up to the end of 2013 A brief history of mass spectrometry in natural products research serves to identify themes which have driven progress in this area of application and in mass spectrometry itself. This account covers six decades of ionization methods, starting with traditional electron ionization and progressing through today's ambient ionization methods. Corresponding developments in mass analyzers are indicated, ranging from sector magnetic fields, through hybrid quadrupole mass filters to miniature ion traps. Current capabilities of mass spectrometry in natural products studies include direct in situ analysis, mass spectrometry imaging, and the study of biosynthetic pathways using metabolomic information. The survey concludes with a discussion of new experiments and capabilities including ion soft landing, preparative mass spectrometry, and accelerated ionic reactions in confined volumes.
Co-reporter:Ahmed M. Hamid, Alan K. Jarmusch, Valentina Pirro, David H. Pincus, Bradford G. Clay, Gaspard Gervasi, and R. Graham Cooks
Analytical Chemistry 2014 Volume 86(Issue 15) pp:7500
Publication Date(Web):July 11, 2014
DOI:10.1021/ac501254b
Paper spray mass spectrometry ambient ionization is utilized for rapid discrimination of bacteria without sample preparation. Bacterial colonies were smeared onto filter paper precut to a sharp point, then wetted with solvent and held at a high potential. Charged droplets released by field emission were sucked into the mass spectrometer inlet and mass spectra were recorded. Sixteen different species representing eight different genera from Gram-positive and Gram-negative bacteria were investigated. Phospholipids were the predominant species observed in the mass spectra in both the negative and positive ion modes. Multivariate data analysis based on principal component analysis, followed by linear discriminant analysis, allowed bacterial discrimination. The lipid information in the negative ion mass spectra proved useful for species level differentiation of the investigated Gram-positive bacteria. Gram-negative bacteria were differentiated at the species level by using a numerical data fusion strategy of positive and negative ion mass spectra.
Co-reporter:Ryan D. Espy, Sebastiaan Frans Teunissen, Nicholas E. Manicke, Yue Ren, Zheng Ouyang, Arian van Asten, and R. Graham Cooks
Analytical Chemistry 2014 Volume 86(Issue 15) pp:7712
Publication Date(Web):June 26, 2014
DOI:10.1021/ac5016408
Determination of eight drugs of abuse in blood has been performed using paper spray or extraction spray mass spectrometry in under 2 min with minimal sample preparation. A method has been optimized for quantification of amphetamine, methamphetamine, 3,4-methylenedioxyamphetamine (MDA), 3,4-methylenedioxy-N-methylamphetamine (MDMA), 3,4-methylenedioxy-N-ethylamphetamine (MDEA), morphine, cocaine, and Δ9-tetrahydrocannabinol (THC) from a single blood spot. Sample to sample variations of 1–5% relative standard deviation were achieved using stable isotope-labeled internal standards and tandem mass spectrometry. Limits of detection for all drugs were below typical physiological and toxicological levels. Paper spray and extraction spray each used less than 10 μL of whole blood. These methods exhibit the potential for performing rapid and high-throughput assays for selective on-site multicompound quantitative screening of illicit drugs.
Co-reporter:Paul I. Hendricks, Jon K. Dalgleish, Jacob T. Shelley, Matthew A. Kirleis, Matthew T. McNicholas, Linfan Li, Tsung-Chi Chen, Chien-Hsun Chen, Jason S. Duncan, Frank Boudreau, Robert J. Noll, John P. Denton, Timothy A. Roach, Zheng Ouyang, and R. Graham Cooks
Analytical Chemistry 2014 Volume 86(Issue 6) pp:2900
Publication Date(Web):February 12, 2014
DOI:10.1021/ac403765x
A major design objective of portable mass spectrometers is the ability to perform in situ chemical analysis on target samples in their native states in the undisturbed environment. The miniature instrument described here is fully contained in a wearable backpack (10 kg) with a geometry-independent low-temperature plasma (LTP) ion source integrated into a hand-held head unit (2 kg) to allow direct surface sampling and analysis. Detection of chemical warfare agent (CWA) simulants, illicit drugs, and explosives is demonstrated at nanogram levels directly from surfaces in near real time including those that have complex geometries, those that are heat-sensitive, and those bearing complex sample matrices. The instrument consumes an average of 65 W of power and can be operated autonomously under battery power for ca. 1.5 h, including the initial pump-down of the manifold. The maximum mass-to-charge ratio is 925 Th with mass resolution of 1–2 amu full width at half-maximun (fwhm) across the mass range. Multiple stages of tandem analysis can be performed to identify individual compounds in complex mixtures. Both positive and negative ion modes are available. A graphical user interface (GUI) is available for novice users to facilitate data acquisition and real-time spectral matching.
Co-reporter:Linfan Li, Tsung-Chi Chen, Yue Ren, Paul I. Hendricks, R. Graham Cooks, and Zheng Ouyang
Analytical Chemistry 2014 Volume 86(Issue 6) pp:2909
Publication Date(Web):February 12, 2014
DOI:10.1021/ac403766c
A benchtop miniature mass spectrometer system, Mini 12, with ambient ionization source and tandem mass spectrometry capabilities has been developed and characterized. This instrument was developed as a self-contained system to produce quantitative results for unprocessed samples of small volumes including nonvolatile analytes. The ion processing system, vacuum system, and control system are detailed. An integrated sample loading system facilitates automated operation. A user interface has been developed to acquire and to interpret analytical results for personnel who have limited mass spectrometry knowledge. Peak widths of Δm/z 0.6 Th (full width at half-maximum) and a mass range of up to m/z 900 are demonstrated with the rectilinear ion trap mass analyzer. Multistage experiments up to MS5 are accomplished. Consumable cartridges have been designed for use in ambient paper spray ionization, and the recently developed extraction spray ionization method has been employed to improve the quantitative performance. Monitoring of trace-levels of chemicals in therapeutic drugs, as well as in food safety and environmental protection operations is demonstrated. Dual MS/MS scans are implemented to obtain the intensities of the fragment ions from the analyte and its internal standard, and the ratio is used in quantitative analysis of complex samples. Limits of quantitation (LOQ) of 7.5 ng/mL, with relative standard deviations below 10%, have been obtained for selected therapeutic drugs in whole blood throughout their individual therapeutic ranges.
Co-reporter:Kevin S. Kerian, Alan K. Jarmusch and R. Graham Cooks  
Analyst 2014 vol. 139(Issue 11) pp:2714-2720
Publication Date(Web):23 Apr 2014
DOI:10.1039/C4AN00548A
Touch spray, a spray-based ambient in situ ionization method, uses a small probe, e.g. a teasing needle to pick up sample and the application of voltage and solvent to cause field-induced droplet emission. Compounds extracted from the microsample are incorporated into the sprayed micro droplets. Performance tests include disease state of tissue, microorganism identification, and therapeutic drug quantitation. Chemical derivatization is performed simultaneously with ionization.
Co-reporter:Alan K. Jarmusch, Valentina Pirro, Kevin S. Kerian and R. Graham Cooks  
Analyst 2014 vol. 139(Issue 19) pp:4785-4789
Publication Date(Web):24 Jul 2014
DOI:10.1039/C4AN00959B
Strep throat causing Streptococcus pyogenes was detected in vitro and in simulated clinical samples by performing touch spray ionization-mass spectrometry. MS analysis took only seconds to reveal characteristic bacterial and human lipids. Medical swabs were used as the substrate for ambient ionization. This work constitutes the initial step in developing a non-invasive MS-based test for clinical diagnosis of strep throat. It is limited to the single species, S. pyogenes, which is responsible for the vast majority of cases. The method is complementary to and, with further testing, a potential alternative to current methods of point-of-care detection of S. pyogenes.
Co-reporter:Ryan M. Bain, Christopher J. Pulliam, Xin Yan, Kassandra F. Moore, Thomas Müller, and R. Graham Cooks
Journal of Chemical Education 2014 Volume 91(Issue 11) pp:1985-1989
Publication Date(Web):August 22, 2014
DOI:10.1021/ed500288m
Undergraduate laboratories generally teach an understanding of chemical reactivity using bulk or semimicroscale experiments with product isolation and subsequent chemical and spectroscopic analysis. In this study students were exposed to mass spectrometry as a means of chemical synthesis as well as analysis. The ionization method used, paper spray, is rapid and can be coupled with online analysis (by mass spectrometry) or off-line analysis (e.g., thin layer chromatography). Chemical synthesis in the course of paper spray ionization takes advantage of the accelerated reaction rates associated with changes in pH and reagent concentrations. Such changes arise from solvent evaporation from charged microdroplets. In these experiments students contrasted paper spray techniques with traditional bulk synthetic methods for the Claisen–Schmidt base-catalyzed condensation. From mass spectral data obtained during the laboratory session, students were able to model electronic effects of substituents on reaction rates. Experimental procedures tailored to the undergraduate organic teaching laboratory are provided.Keywords: Hands-on Learning/Manipulatives; Instrumental Methods; Kinetics; Laboratory Instruction; Mass Spectrometry; Organic Chemistry; Qualitative Analysis; Second-Year Undergraduate; Synthesis; Upper-Division Undergraduate;
Co-reporter:Ryan D. Espy, Michael Wleklinski, Xin Yan, R. Graham Cooks
TrAC Trends in Analytical Chemistry 2014 Volume 57() pp:135-146
Publication Date(Web):May 2014
DOI:10.1016/j.trac.2014.02.008
•We review chemical reactions associated with ambient ionization mass spectrometry.•Ambient ionization reactions improve analytical sensitivity.•Ambient ionization reactions elucidate mechanisms of reactions.•Ambient ionization reactions may be used to perform rapid preparative chemistry.•Ambient ionization enables in situ reactions rapidly, directly on native samples.Ionic reactions in bulk solution generally occur relatively slowly, and the course of reaction can be followed by on-line monitoring using, for example, electrospray ionization mass spectrometry (MS). In another approach, ionic reactions occurring in confined volumes can be studied with a focus on increasing reaction rates upon reduction in solution volume (e.g., by solvent evaporation from small droplets). Such a situation is encountered in ambient ionization MS, which involves the ionization of samples in their native state without significant sample preparation. Reagents can be included in the spray solvents used in ambient ionization and rapid derivatization reactions can accompany ionization. These latter experiments form the topic of this review. Emphasis is on their value in chemical analysis, but the products of these reactions can also be collected easily and form the basis for small-scale synthesis.
Co-reporter:Sandro Santagata;Livia S. Eberlin;Isaiah Norton;David Calligaris;Daniel R. Feldman;Jennifer L. Ide;Xiaohui Liu;Joshua S. Wiley;Matthew L. Vestal;Shakti H. Ramkissoon;Daniel A. Orringer;Kristen K. Gill;Ian F. Dunn;Dora Dias-Santagata;Keith L. Ligon;Ferenc A. Jolesz;Alexandra J. Golby;Nathalie Y. R. Agar
PNAS 2014 Volume 111 (Issue 30 ) pp:11121-11126
Publication Date(Web):2014-07-29
DOI:10.1073/pnas.1404724111
For many intraoperative decisions surgeons depend on frozen section pathology, a technique developed over 150 y ago. Technical innovations that permit rapid molecular characterization of tissue samples at the time of surgery are needed. Here, using desorption electrospray ionization (DESI) MS, we rapidly detect the tumor metabolite 2-hydroxyglutarate (2-HG) from tissue sections of surgically resected gliomas, under ambient conditions and without complex or time-consuming preparation. With DESI MS, we identify isocitrate dehydrogenase 1-mutant tumors with both high sensitivity and specificity within minutes, immediately providing critical diagnostic, prognostic, and predictive information. Imaging tissue sections with DESI MS shows that the 2-HG signal overlaps with areas of tumor and that 2-HG levels correlate with tumor content, thereby indicating tumor margins. Mapping the 2-HG signal onto 3D MRI reconstructions of tumors allows the integration of molecular and radiologic information for enhanced clinical decision making. We also validate the methodology and its deployment in the operating room: We have installed a mass spectrometer in our Advanced Multimodality Image Guided Operating (AMIGO) suite and demonstrate the molecular analysis of surgical tissue during brain surgery. This work indicates that metabolite-imaging MS could transform many aspects of surgical care.
Co-reporter:Anyin Li;Qingjie Luo; So-Jung Park; R. Graham Cooks
Angewandte Chemie International Edition 2014 Volume 53( Issue 12) pp:3147-3150
Publication Date(Web):
DOI:10.1002/anie.201309193

Abstract

Noble metals can be ionized by electrochemical corrosion and transported by electrospray ionization. Mass spectrometry (MS) showed solvated metal ions as the main ionic constituent of the sprayed droplets. Collection of the electrospray plume on a surface yielded noble metal nanoparticles (NPs) under ambient conditions. The NPs were characterized by several techniques. Under typical conditions, capped-nanoparticle sizes averaged 2.2 nm for gold and 6.5 nm for silver. The gold nanoparticles showed high catalytic activity in the reduction of p-nitrophenol by NaBH4. Efficient catalysis was also observed by simply directing the spray of solvated Au+ onto the surface of an aqueous p-nitrophenol/NaBH4 mixture. Organometallic ions were generated by spiking ligands into the spray solvent: for example, CuI bipyridine cations dominated the spray during Cu electrocorrosion in acetonitrile containing bipyridine. This organometallic reagent was shown to be effective in the radical polymerization of styrene.

Co-reporter:Xin Yan;Ewa Sokol;Dr. Xin Li;Guangtao Li;Dr. Shiqing Xu ; R. Graham Cooks
Angewandte Chemie International Edition 2014 Volume 53( Issue 23) pp:5931-5935
Publication Date(Web):
DOI:10.1002/anie.201310493

Abstract

Reaction monitoring using inductive ESI mass spectrometry allows chemical reactions to be tracked in real time, including air- and moisture-sensitive as well as heterogeneous reactions. Highly concentrated solutions can also be monitored for long periods without emitter clogging. Sheath gas assists in nebulization and a sample splitter reduces the delay time and minimizes contamination of the instrument. Short-lived intermediates (ca. 5 s) were observed in Pd/C-catalyzed hydrogenolysis, and several intermediates were seen in Negishi cross-coupling reactions.

Co-reporter:Dr. Anyin Li;Zane Baird;Dr. Soumabha Bag;Depanjan Sarkar;Anupama Prabhath; Thalappil Pradeep; R. Graham Cooks
Angewandte Chemie International Edition 2014 Volume 53( Issue 46) pp:12528-12531
Publication Date(Web):
DOI:10.1002/anie.201406660

Abstract

Electrolytic spray deposition was used to pattern surfaces with 2D metallic nanostructures. Spots that contain silver nanoparticles (AgNP) were created by landing solvated silver ions at desired locations using electrically floated masks to focus the metal ions to an area as little as 20 μm in diameter. The AgNPs formed are unprotected and their aggregates can be used for surface-enhanced Raman spectroscopy (SERS). The morphology and SERS activity of the NP structures were controlled by the surface coverage of landed silver ions. The NP structures created could be used as substrates onto which SERS samples were deposited or prepared directly on top of predeposited samples of interest. The evenly distributed hot spots in the micron-sized aggregates had an average SERS enhancement factor of 108. The surfaces showed SERS activity when using lasers of different wavelengths (532, 633, and 785 nm) and were stable in air.

Co-reporter:Anyin Li;Qingjie Luo; So-Jung Park; R. Graham Cooks
Angewandte Chemie 2014 Volume 126( Issue 12) pp:3211-3214
Publication Date(Web):
DOI:10.1002/ange.201309193

Abstract

Noble metals can be ionized by electrochemical corrosion and transported by electrospray ionization. Mass spectrometry (MS) showed solvated metal ions as the main ionic constituent of the sprayed droplets. Collection of the electrospray plume on a surface yielded noble metal nanoparticles (NPs) under ambient conditions. The NPs were characterized by several techniques. Under typical conditions, capped-nanoparticle sizes averaged 2.2 nm for gold and 6.5 nm for silver. The gold nanoparticles showed high catalytic activity in the reduction of p-nitrophenol by NaBH4. Efficient catalysis was also observed by simply directing the spray of solvated Au+ onto the surface of an aqueous p-nitrophenol/NaBH4 mixture. Organometallic ions were generated by spiking ligands into the spray solvent: for example, CuI bipyridine cations dominated the spray during Cu electrocorrosion in acetonitrile containing bipyridine. This organometallic reagent was shown to be effective in the radical polymerization of styrene.

Co-reporter:Xin Yan;Ewa Sokol;Dr. Xin Li;Guangtao Li;Dr. Shiqing Xu ; R. Graham Cooks
Angewandte Chemie 2014 Volume 126( Issue 23) pp:6041-6045
Publication Date(Web):
DOI:10.1002/ange.201310493

Abstract

Reaction monitoring using inductive ESI mass spectrometry allows chemical reactions to be tracked in real time, including air- and moisture-sensitive as well as heterogeneous reactions. Highly concentrated solutions can also be monitored for long periods without emitter clogging. Sheath gas assists in nebulization and a sample splitter reduces the delay time and minimizes contamination of the instrument. Short-lived intermediates (ca. 5 s) were observed in Pd/C-catalyzed hydrogenolysis, and several intermediates were seen in Negishi cross-coupling reactions.

Co-reporter:Joshua S. Wiley, Jacob T. Shelley, and R. Graham Cooks
Analytical Chemistry 2013 Volume 85(Issue 14) pp:6545
Publication Date(Web):May 30, 2013
DOI:10.1021/ac4013286
We describe a handheld, wireless low-temperature plasma (LTP) ambient ionization source and its performance on a benchtop and a miniature mass spectrometer. The source, which is inexpensive to build and operate, is battery-powered and utilizes miniature helium cylinders or air as the discharge gas. Comparison of a conventional, large-scale LTP source against the handheld LTP source, which uses less helium and power than the large-scale version, revealed that the handheld source had similar or slightly better analytical performance. Another advantage of the handheld LTP source is the ability to quickly interrogate a gaseous, liquid, or solid sample without requiring any setup time. A small, 7.4-V Li-polymer battery is able to sustain plasma for 2 h continuously, while the miniature helium cylinder supplies gas flow for approximately 8 continuous hours. Long-distance ion transfer was achieved for distances up to 1 m.
Co-reporter:Anyin Li, Pu Wei, Hsu-Chen Hsu and R. Graham Cooks  
Analyst 2013 vol. 138(Issue 16) pp:4624-4630
Publication Date(Web):31 May 2013
DOI:10.1039/C3AN00888F
Rapid qualitative and quantitative analysis of 4-methylimidazole (4-MEI) in caramel and beverage samples is demonstrated using the paper spray form of ambient ionization mass spectrometry. The minimum level of pure 4-MEI detectable using multiple reaction monitoring (MRM) in a triple quadrupole instrument was 3 pg μL−1 in neat solvent and 5 pg μL−1 in a matrix containing caramel. This method was used to analyze 11 caramel samples for 4-MEI. After implementing effective quality control protocols, average relative standard deviations for paper spray triple quadrupole MS were less than 15% and the linear dynamic range was three orders of magnitude. Results obtained on three different days by two different analyst groups agreed closely. An ion trap tandem MS method of approximate quantitative analysis is also described and it gave similar precision to the triple quadrupole experiment when fluctuations in ion currents were cancelled by simultaneously isolating the analyte and internal standard and fragmenting both in an ion trap simultaneous MRM experiment. As another alternative, a rapid qualitative screening method based on the use of high-resolution measurements instead of tandem mass spectrometry using an Orbitrap was also tested and found to give a detection limit of 100 pg μL−1.
Co-reporter:Fred. P. M. Jjunju, Anyin Li, Abraham Badu-Tawiah, Pu Wei, Linfan Li, Zheng Ouyang, Iman S. Roqan and R. Graham Cooks  
Analyst 2013 vol. 138(Issue 13) pp:3740-3748
Publication Date(Web):09 May 2013
DOI:10.1039/C3AN00249G
Paper spray (PS) ambient ionization is implemented using a portable mass spectrometer and applied to the detection of alkyl quaternary ammonium salts in a complex oil matrix. These salts are commonly used as active components in the formulation of corrosion inhibitors. They were identified in oil and confirmed by their fragmentation patterns recorded using tandem mass spectrometry (MS/MS). The cations of alkyl and benzyl-substituted quaternary ammonium salts showed characteristic neutral losses of CnH2n (n carbon number of the longest chain) and C7H8, respectively. Individual quaternary ammonium compounds were detected at low concentrations (<1 ng μL−1) and over a dynamic range of ∼5 pg μL−1 to 500 pg μL−1 (ppb). Direct detection of these compounds in complex oil samples without prior sample preparation or pre-concentration was also demonstrated using a home-built miniature mass spectrometer at levels below 1 ng μL−1.
Co-reporter:Fred P.M. Jjunju, Abraham K. Badu-Tawiah, Anyin Li, Santosh Soparawalla, Iman S. Roqan, R. Graham Cooks
International Journal of Mass Spectrometry 2013 Volumes 345–347() pp:80-88
Publication Date(Web):1 July 2013
DOI:10.1016/j.ijms.2012.08.030
Characterization of the various petroleum constituents (hydronaphthalenes, thiophenes, alkyl substituted benzenes, pyridines, fluorenes, and polycyclic aromatic hydrocarbons) was achieved under ambient conditions without sample preparation by desorption atmospheric pressure chemical ionization (DAPCI). Conditions were chosen for the DAPCI experiments to control whether ionization was by proton or electron transfer. The protonated molecule [M+H]+ and the hydride abstracted [MH]+ form were observed when using an inert gas, typically nitrogen, to direct a lightly ionized plasma generated by corona discharge onto the sample surface in air. The abundant water cluster ions generated in this experiment react with condensed-phase functionalized hydrocarbon model compounds and their mixtures at or near the sample surface. On the other hand, when naphthalene was doped into the DAPCI gas stream, its radical cation served as a charge exchange reagent, yielding molecular radical cations (M+) of the hydrocarbons. This mode of sample ionization provided mass spectra with better signal/noise ratios and without unwanted side-products. It also extended the applicability of DAPCI to petroleum constituents which could not be analyzed through proton transfer (e.g., higher molecular PAHs such as chrysene). The thermochemistry governing the individual ionization processes is discussed and a desorption/ionization mechanism is inferred.Graphical abstractHighlights► Analysis of petroleum constituents is achieved under ambient conditions. ► Proton or electron transfer reactions are carried out under ambient conditions. ► Charge exchange using naphthalene as the DAPCI reagent gave simple mass spectra consisting of only molecular cation M+ without side products. ► Unleaded gasoline and diesel standard mixtures can be characterized.
Co-reporter:Anyin Li;Fred P. M. Jjunju
Journal of The American Society for Mass Spectrometry 2013 Volume 24( Issue 11) pp:1745-1754
Publication Date(Web):2013 November
DOI:10.1007/s13361-013-0710-1
The reactivity of aryl cations toward molecular nitrogen is studied systematically in an ion trap mass spectrometer at 102 Pascal of nitrogen, the pressure of the Titan main haze layer. Nucleophilic addition of dinitrogen occurs and the nature of aryl group has a significant influence on the reactivity, through inductive effects and by changing the ground state spin multiplicity. The products of nitrogen activation, aryldiazonium ions, react with typical nitriles, aromatic amines, and alkynes (compounds that are relevant as possible Titan atmosphere constituents) to form covalently bonded heterocyclic products. Theoretical calculations at the level [DFT(B3LYP)/6-311++G(d,p)] indicate that the N2 addition reaction is exothermic for the singlet aryl cations but endothermic for their triplet spin isomers. The –OH and –NH2 substituted aryl ions are calculated to have triplet ground states, which is consistent with their decreased nitrogen addition reactivity. The energy needed for the generation of the aryl cations from their protonated precursors (ca. 340 kJ/mol starting with protonated aniline) is far less than that required to directly activate the nitrogen triple bond (the lowest energy excited state of N2 lies ca. 600 kJ/mol above the ground state). The formation of aza-aromatics via arene ionization and subsequent reactions provide a conceivable route to the genesis of nitrogen-containing organic molecules in the interstellar medium and Titan haze layers.
Co-reporter:Livia S. Eberlin;Isaiah Norton;Daniel Orringer;Ian F. Dunn;Xiaohui Liu;Jennifer L. Ide;Alan K. Jarmusch;Keith L. Ligon;Ferenc A. Jolesz;Alexandra J. Golby;Sandro Santagata;Nathalie Y. R. Agar
PNAS 2013 110 (5 ) pp:1611-1616
Publication Date(Web):2013-01-29
DOI:10.1073/pnas.1215687110
The main goal of brain tumor surgery is to maximize tumor resection while preserving brain function. However, existing imaging and surgical techniques do not offer the molecular information needed to delineate tumor boundaries. We have developed a system to rapidly analyze and classify brain tumors based on lipid information acquired by desorption electrospray ionization mass spectrometry (DESI-MS). In this study, a classifier was built to discriminate gliomas and meningiomas based on 36 glioma and 19 meningioma samples. The classifier was tested and results were validated for intraoperative use by analyzing and diagnosing tissue sections from 32 surgical specimens obtained from five research subjects who underwent brain tumor resection. The samples analyzed included oligodendroglioma, astrocytoma, and meningioma tumors of different histological grades and tumor cell concentrations. The molecular diagnosis derived from mass-spectrometry imaging corresponded to histopathology diagnosis with very few exceptions. Our work demonstrates that DESI-MS technology has the potential to identify the histology type of brain tumors. It provides information on glioma grade and, most importantly, may help define tumor margins by measuring the tumor cell concentration in a specimen. Results for stereotactically registered samples were correlated to preoperative MRI through neuronavigation, and visualized over segmented 3D MRI tumor volume reconstruction. Our findings demonstrate the potential of ambient mass spectrometry to guide brain tumor surgery by providing rapid diagnosis, and tumor margin assessment in near–real time.
Co-reporter:Livia S. Eberlin;Isaiah Norton;Daniel Orringer;Ian F. Dunn;Xiaohui Liu;Jennifer L. Ide;Alan K. Jarmusch;Keith L. Ligon;Ferenc A. Jolesz;Alexandra J. Golby;Sandro Santagata;Nathalie Y. R. Agar
PNAS 2013 110 (5 ) pp:1611-1616
Publication Date(Web):
DOI:10.1073/pnas.1215687110
Co-reporter:Xin Yan;Dr. Rodinei Augusti;Dr. Xin Li;Dr. R. Graham Cooks
ChemPlusChem 2013 Volume 78( Issue 9) pp:1142-1148
Publication Date(Web):
DOI:10.1002/cplu.201300172

Abstract

Paper spray ionization can be used to study organic reactions in solution under ambient conditions by utilizing the rate acceleration that occurs in reactions in small volumes of solution. In this novel approach to performing reactions, reagents are transferred onto a triangular paper surface by drop-casting and charged droplets of the reaction product mixture are released by field evaporation and examined online by mass spectrometry. The increase in the rate of product formation is attributed to solvent evaporation, which increases reagent concentrations, changes the pH, and enhances intermolecular interactions. As a proof of principle, the Katritzky reaction between a pyrylium salt and mono- or diamines, including substituted anilines, was investigated. The influence of electronic and steric effects was evaluated straightforwardly. The carbon chain length of α,ω-diamines was found to control the formation of mono- versus disubstituted products, thus reflecting the strong destabilizing coulombic effects in the shorter carbon-chain systems. Information on the mechanism was provided by the observation of 2H-pyran intermediates and mixed pyridinium–2H-pyran ions. The rates of product formation in the base-assisted Katritzky reaction increase linearly from 0.1 to 10 equivalents of triethylamine. The reactive paper spray technique, owing to its speed and information content, has potential pedagogical value and provides a tool to explore organic reactions and correlate experimental results with current mechanistic understanding.

Co-reporter:Guangtao Li;Dr. Xin Li; Zheng Ouyang; R. Graham Cooks
Angewandte Chemie 2013 Volume 125( Issue 3) pp:1074-1077
Publication Date(Web):
DOI:10.1002/ange.201207997
Co-reporter:Guangtao Li;Dr. Xin Li; Zheng Ouyang; R. Graham Cooks
Angewandte Chemie International Edition 2013 Volume 52( Issue 3) pp:1040-1043
Publication Date(Web):
DOI:10.1002/anie.201207997
Co-reporter:Jobin Cyriac, T. Pradeep, H. Kang, R. Souda, and R. G. Cooks
Chemical Reviews 2012 Volume 112(Issue 10) pp:5356
Publication Date(Web):August 22, 2012
DOI:10.1021/cr200384k
Co-reporter:Sheran A. Oradu and R. Graham Cooks
Analytical Chemistry 2012 Volume 84(Issue 24) pp:10576
Publication Date(Web):November 26, 2012
DOI:10.1021/ac301709r
Paper spray ionization, an ambient ionization method, has been applied for the identification of polar lipids in green microalgae with no sample preparation. A multistep experimental protocol was employed to characterize the lipid species of two microalgae strains, Kyo-Chlorella in tablet form and Nannochloropsis in paste form by mass spectrometry (MS). Tandem mass spectrometry (MS/MS) experiments using collision induced dissociation (CID) were employed for initial characterization of the detected lipid species, which were dominated by polar glycolipids and phospholipids. Product ion scan experiments were performed to determine the lipid head groups and fatty acid composition. Precursor ion scan experiments using fragment ions such as m/z 184, which is characteristic of the phosphocholine headgroup, were then used to confirm the lipid classification. Lipid elemental compositions were determined by exact mass measurements using high resolution mass spectrometry. Finally, the position of unsaturation was determined using reactive paper spray ionization experiments with ozone used as a reagent to cleave double bonds. Ozone was produced in situ using dielectric barrier discharge from a low temperature plasma, and it reacted in ambient air with the spray of ions produced by paper spray ionization. Using the precursor ion scan experiment, the resulting ozone cleavage product ions were used to determine the position of unsaturation for some of these species. By applying this experimental protocol, the molecular formulas and key aspects of the structures of glycerophosphocholines (PCs) such as 9Z-16:1/9Z,12Z-16:2 PC and 6Z,9Z-18:2/6Z,9Z,12Z-18:3PC and monogalactosyldiacylglycerols (MGDGs) such as 18:3/16:3MGDG were identified in the positive ion mode, while glycerophosphoglycerols (PGs) such as 18:3/16:0 PG and sulfoquinovosyldiacylglycerols (SQDGs) such as 18:3/16:0 SQDG were identified in the negative ion mode.
Co-reporter:Jobin Cyriac, Michael Wleklinski, Guangtao Li, Liang Gao and R. Graham Cooks  
Analyst 2012 vol. 137(Issue 6) pp:1363-1369
Publication Date(Web):09 Feb 2012
DOI:10.1039/C2AN16163J
The design and characterization of a system for in situ Raman analysis of surfaces prepared by ion soft landing (SL) is described. The performance of the new high vacuum compatible, low cost, surface analysis capability is demonstrated with surface enhanced Raman spectroscopy (SERS) of surfaces prepared by soft landing of ions of crystal violet, Rhodamine 6G, methyl orange and copper phthalocyanine. Complementary in situ mass spectrometric information is recorded for the same surfaces using a previously implemented secondary ion mass spectrometer (SIMS). Imaging of the modified surfaces is achieved using 2D Raman imaging as demonstrated for the case of Rhodamine 6G soft landing. The combination of the powerful molecular characterization tools of SERS and SIMS in a single instrument fitted with in-vacuum sample transport capabilities, facilitates in situ analysis of surfaces prepared by ion SL. In particular, information is provided on the charge state of the soft landed species. In the case of crystal violet the SERS data suggest that the positively charged ions being landed retain their charge state on the surface under vacuum. By contrast, in the case of methyl orange which is landed as an anion, the SERS spectra suggest that the SL species has been neutralized.
Co-reporter:Fatkhulla K. Tadjimukhamedov, Guangming Huang, Zheng Ouyang and R. Graham Cooks  
Analyst 2012 vol. 137(Issue 5) pp:1082-1084
Publication Date(Web):17 Jan 2012
DOI:10.1039/C2AN16077C
A new ambient ionization method - leaf-spray mass spectrometry - is used to detect allergenic urushiols directly from poison ivy (T. radicans) leaves with no sample preparation. These simple measurements show all the urushiols previously reported using liquid chromatography mass spectrometry methods. Tandem mass spectrometry analysis of the leaf spray ions confirms the identifications. Enhanced detection of some urushiols was achieved in the negative mode with the addition of chloride anions to the spray solvent.
Co-reporter:J. Isabella Zhang, Xin Li, Zheng Ouyang and R. Graham Cooks  
Analyst 2012 vol. 137(Issue 13) pp:3091-3098
Publication Date(Web):13 Apr 2012
DOI:10.1039/C2AN16263F
Leaf spray mass spectrometry is explored as a fast and simple way for direct analysis of sweet glycosides in fresh untreated Stevia leaves without sample pretreatment. In this technique, a fresh triangular piece of Stevia leaf serves as both sample and substrate. Application of a butanol:methanol:water mixture and a high voltage to intact leaf material produces a high electric field at the tip of the leaf. This results in field emission of charged droplets containing the glycosides. The resulting dry ions are detected by mass spectrometry and confirmed by tandem mass spectrometry and exact mass measurements. A comparison between leaf spray and other ambient ionization methods which are successful for screening glycosides in Stevia leaves – desorption electrospray ionization, low temperature plasma and paper spray – shows that leaf spray produces the highest quality spectra. It is also extremely easy to implement with no need for nebulizing gas or sample preparation and is suited to semi-quantitative determinations. The potential for the application of leaf spray mass spectrometry to direct and rapid screening of plant materials is here realized in the case of Stevia sweet glycosides.
Co-reporter:Valentina Pirro, Livia S. Eberlin, Paolo Oliveri and R. Graham Cooks  
Analyst 2012 vol. 137(Issue 10) pp:2374-2380
Publication Date(Web):20 Mar 2012
DOI:10.1039/C2AN35122F
Desorption electrospray ionization (DESI) is an ambient mass spectrometry (MS) technique that can be operated in an imaging mode. It is known to provide valuable information on disease state and grade based on lipid profiles in tissue sections. Comprehensive exploration of the spatial and chemical information contained in 2D MS images requires further development of methods for data treatment and interpretation in conjunction with multivariate analysis. In this study, we employ an interactive approach based on principal component analysis (PCA) to interpret the chemical and spatial information obtained from MS imaging of human bladder, kidney, germ cell and prostate cancer and adjacent normal tissues. This multivariate strategy facilitated distinction between tumor and normal tissue by correlating the lipid information with pathological evaluation of the same samples. Some common lipid ions, such as those of m/z 885.5 and m/z 788.5, nominally PI(18:0/20:4) and PS(18:0/18:1), as well as ions of free fatty acids and their dimers, appeared to be highly characterizing for different types of human cancers, while other ions, such as those of m/z 465.5 (cholesterol sulfate) for prostate cancer tissue and m/z 795.5 (seminolipid 16:0/16:0) for germ tissue, appeared to be extremely selective for the type of tissue analyzed. These data confirm that lipid profiles can reflect not only the disease/health state of tissue but also are characteristic of tissue type. The manual interactive strategy presented here is particularly useful to visualize the information contained in hyperspectral MS images by automatically connecting regions of PCA score space to pixels of the 2D physical object. The procedures developed in this study consider all the spectral variables and their inter-correlations, and guide subsequent investigations of the mass spectra and single ion images to allow one to maximize characterization between different regions of any DESI-MS image.
Co-reporter:Ryan D. Espy, Nicholas E. Manicke, Zheng Ouyang and R. Graham Cooks  
Analyst 2012 vol. 137(Issue 10) pp:2344-2349
Publication Date(Web):20 Mar 2012
DOI:10.1039/C2AN35082C
Paper spray mass spectrometry is applied to oncology drugs in fresh whole blood samples supported on filter paper substrates instead of dry blood as done previously. Addition of the coagulant alum clotted the blood and allowed for immediate sample analysis. The coagulant did not interfere with the function of the paper spray nor did it add features to the mass spectra. Quantitative analysis of therapeutic drugs in the blood was achieved utilizing internal standards which were pre-spotted onto the filter paper. Eight oncology drugs were examined, with lower limits of detection ranging between 0.5 and 17 ng mL−1 and linear dynamic ranges greater than two orders of magnitude. Inter-day accuracies of quality controls for pazopanib ranged from 102 to 118%, with imprecisions of 9 to 13%. This one-step method requires 10 μL of blood, a drop of solvent, and takes 45 seconds per trial. These results indicate applicability to point-of-care therapeutic drug monitoring in a clinical setting.
Co-reporter:Naim Malaj, Zheng Ouyang, Giovanni Sindona and R. Graham Cooks  
Analytical Methods 2012 vol. 4(Issue 7) pp:1913-1919
Publication Date(Web):07 Jun 2012
DOI:10.1039/C2AY25222H
Leaf spray, a rapid and simple ambient ionization method for mass spectrometry is shown to allow identification of a number of typical pesticides (acetamiprid, diphenylamine, imazalil, linuron, thiabendazole) directly in the peel and pulp of a variety of different fruits and vegetables (apple, pear, lemon, orange, carrot, cucumber, eggplant, potato). These identifications were confirmed by tandem mass spectrometry. Attempts were made to quantify the amount of pesticide using MS/MS data from calibration curves created with external standards. Calibration samples were made using samples created by adding pesticide standards to organic fruit or vegetable. Typical experiments take approximately 100 seconds to perform; limits of detection are within the levels specified for residue analysis by the EU. Linear dynamic ranges of three orders of magnitude and precisions of better than 15% are obtained.
Co-reporter:Ryan D. Espy, Ariel R. Muliadi, Zheng Ouyang, R. Graham Cooks
International Journal of Mass Spectrometry 2012 Volumes 325–327() pp:167-171
Publication Date(Web):1 July 2012
DOI:10.1016/j.ijms.2012.06.017
Images and droplet size measurements show that paper spray operates in two distinct spray modes. Mode 1 occurs in solvent-rich systems in which multiple Taylor conejets are created producing droplets of a range of sizes. Mode 2 occurs at low solvent flow rates and the higher currents (∼1 uA) suggest a contribution from corona discharge. The latter experiment produces monodispersed droplet sizes. A distinguishing feature of paper spray in both modes is a fixed droplet velocity independent of droplet size.Graphical abstractHighlights► We describe the spray modes during paper spray ionization. ► When solvent-rich, paper spray produces multimodal droplet distributions. ► Solvent-deficient paper spray produces monodisperse drops and a corona discharge. ► Microfiber structures enhance the electric field near the Taylor cone(s).
Co-reporter:Qian Yang, He Wang, Jeffrey D. Maas, William J. Chappell, Nicholas E. Manicke, R. Graham Cooks, Zheng Ouyang
International Journal of Mass Spectrometry 2012 Volume 312() pp:201-207
Publication Date(Web):15 February 2012
DOI:10.1016/j.ijms.2011.05.013
Paper spray ionization has been developed as a direct, fast and low-cost sampling and ionization method for qualitative and quantitative mass spectrometric (MS) analysis of complex mixtures. Analyte ions are generated by applying a high voltage and a small volume (∼10 μL) of spray solvent onto a porous substrate. The sample can be preloaded onto the paper or mixed into the spray solution. The geometry of the paper and the method of supplying the necessary internal standard are important factors that affect the ionization efficiency and subsequently the sensitivity and quantitation accuracy of the analytical data. As the cut angle of the paper tip is changed, the spray plume, the total spray current and the electric field intensity at the tip all vary correspondingly, with resulting differences in signal intensity. Sample load is another important factor for obtaining a stable MS signal and accurate quantitative results. The optimal sample load was found to be dependent on the paper size. The dissolution and spray process was also investigated and analyte transfer on paper was shown to be largely associated with bulk solution flow toward the spray tip. The information gathered from these systematic studies provides guidance for the design and optimization of a disposable sample cartridge for paper spray MS, a device which potentially is suitable for fast clinical analysis, especially for point-of-care diagnostics.Graphical abstractHighlights► Systematic investigation of the design factors for paper spray ionization source. ► Characterization of analyte transfer on paper media for paper spray. ► Design of disposable paper spray sample device.
Co-reporter:Dr. Thomas Müller;Dr. Abraham Badu-Tawiah; R. Graham Cooks
Angewandte Chemie International Edition 2012 Volume 51( Issue 47) pp:11832-11835
Publication Date(Web):
DOI:10.1002/anie.201206632
Co-reporter:Dr. Thomas Müller;Dr. Abraham Badu-Tawiah; R. Graham Cooks
Angewandte Chemie International Edition 2012 Volume 51( Issue 47) pp:
Publication Date(Web):
DOI:10.1002/anie.201207836
Co-reporter:Abraham K. Badu-Tawiah;Anyin Li;Fred P. M. Jjunju ; R. Graham Cooks
Angewandte Chemie International Edition 2012 Volume 51( Issue 37) pp:9417-9421
Publication Date(Web):
DOI:10.1002/anie.201205044
Co-reporter:Abraham K. Badu-Tawiah;Anyin Li;Fred P. M. Jjunju ; R. Graham Cooks
Angewandte Chemie 2012 Volume 124( Issue 37) pp:9551-9555
Publication Date(Web):
DOI:10.1002/ange.201205044
Co-reporter:Abraham K. Badu-Tawiah;Jobin Cyriac
Journal of The American Society for Mass Spectrometry 2012 Volume 23( Issue 5) pp:842-849
Publication Date(Web):2012 May
DOI:10.1007/s13361-012-0337-7
Solvent-free ion/surface chemistry is studied at atmospheric pressure, specifically pyrylium cations, are reacted at ambient surfaces with organic amines to generate pyridinium ions. The dry reagent ions were generated by electrospraying a solution of the organic salt and passing the resulting electrosprayed droplets pneumatically through a heated metal drying tube. The dry ions were then passed through an electric field in air to separate the cations from anions and direct the cations onto a gold substrate coated with an amine. This nontraditional way of manipulating polyatomic ions has provided new chemical insights, for example, the surface reaction involving dry isolated 2,4,6-triphenylpyrylium cations and condensed solid-phase ethanolamine was found to produce the expected N-substituted pyridinium product ion via a pseudobase intermediate in a regiospecific fashion. In solution however, ethanolamine was observed to react through its N-centered and O-centered nucleophilic groups to generate two isomeric products via 2H-pyran intermediates. The O-centered nucleophile reacted less rapidly to give the minor product. The surface reaction product was characterized in situ by surface enhanced Raman spectroscopy, and ex situ using mass spectrometry and H/D exchange, and found to be chemically the same as the major pyridinium solution-phase reaction product.
Co-reporter:Zane Baird, Wen-Ping Peng, R. Graham Cooks
International Journal of Mass Spectrometry 2012 s 330–332() pp: 277-284
Publication Date(Web):
DOI:10.1016/j.ijms.2012.09.009
Co-reporter:Christina R. Ferreira;Valentina Pirro
Analytical and Bioanalytical Chemistry 2012 Volume 404( Issue 10) pp:2915-2926
Publication Date(Web):2012 December
DOI:10.1007/s00216-012-6426-4
Knowledge of the lipids present in individual preimplantation embryos is of interest in fundamental studies of embryology, in attempts to understand cellular pluripotency and in optimization of in vitro culture conditions necessary for the application and development of biotechnologies such as in vitro fertilization and transgenesis. In this work, the profiles of fatty acids and phospholipids (PL) in individual mouse preimplantation embryos and oocytes were acquired using an analytical strategy based on desorption electrospray ionization mass spectrometry (DESI-MS). The methodology avoids sample preparation and provides information on the lipids present in these microscopic structures. Differences in the lipid profiles observed for unfertilized oocytes, two- and four-cell embryos, and blastocysts were characterized. For a representative set of embryos (N = 114) using multivariate analysis (specifically principal component analysis) unfertilized oocytes showed a narrower range of PL species than did blastocysts. Two- and four-cell embryos showed a wide range of PLs compared with unfertilized oocytes and high abundances of fatty acids, indicating pronounced synthetic activity. The data suggest that the lipid changes observed in mouse preimplantation development reflect acquisition of a degree of cellular membrane functional and structural specialization by the blastocyst stage. It is also noteworthy that embryos cultured in vitro from the two-cell through the blastocyst stage have a more homogeneous lipid profile as compared with their in vivo-derived counterparts, which is ascribed to the restricted diversity of nutrients present in synthetic culture media. The DESI-MS data are interpreted from lipid biochemistry and previous reports on gene expression of diverse lipids known to be vital to early embryonic development.
Co-reporter:Dahlia I. Campbell;Christina R. Ferreira
Analytical and Bioanalytical Chemistry 2012 Volume 404( Issue 2) pp:389-398
Publication Date(Web):2012 August
DOI:10.1007/s00216-012-6173-6
Desorption electrospray ionization imaging allows biomarker discovery and disease diagnosis through chemical characterization of biological samples in their native environment. Optimization of experimental parameters including emitter capillary size, solvent composition, solvent flow rate, mass spectrometry scan-rate and step-size is shown here to improve the resolution available in the study of biological tissue from 180 μm to about 35 μm using an unmodified commercial mass spectrometer. Mouse brain tissue was used to optimize and measure resolution based on known morphological features and their known relationships to major phospholipid components. Features of approximately 35 μm were resolved and correlations drawn between features in grey matter (principally PS (18:0/22:6), m/z 834) and in white matter (principally ST (24:1), m/z 888). The improved spatial resolution allowed characterization of the temporal changes in lipid profiles occurring within mouse ovaries during the ovulatory cycle. An increase in the production of phosphatidylinositol (PI 38:4) m/z 885 and associated fatty acids such as arachidonic acid (FA 20:4) m/z 303 and adrenic acid (FA 22:4) m/z 331was seen with the postovulatory formation of the corpus luteum.
Co-reporter:Abraham K. Badu-Tawiah;Dahlia I. Campbell
Journal of The American Society for Mass Spectrometry 2012 Volume 23( Issue 9) pp:1461-1468
Publication Date(Web):2012 September
DOI:10.1007/s13361-012-0394-y
The aza-Michael addition and the Mannich condensation occur in thin films deposited on ambient surfaces. The reagents for both C–N bond formation reactions were transferred onto the surface by drop-casting using a micropipette. The surface reactions were found to be much more efficient than the corresponding bulk solution-phase reactions performed on the same scale in the same acetonitrile solvent. The increase in rate of product formation in the thin film is attributed to solvent evaporation in the open air which results in reagent concentration and produces rate acceleration similar to that seen in evaporating droplets in desorption electrospray ionization. This thin film procedure has potential for the rapid synthesis of reaction products on a small scale, as well as allowing rapid derivatization of analytes to produce forms that are easily ionized by electrospray ionization. Analysis of the derivatized sample directly from the reaction surface through the use of desorption electrospray ionization is also demonstrated.
Co-reporter:Abraham K. Badu-Tawiah;Dahlia I. Campbell
Journal of The American Society for Mass Spectrometry 2012 Volume 23( Issue 6) pp:1077-1084
Publication Date(Web):2012 June
DOI:10.1007/s13361-012-0365-3
The exposure of charged microdroplets containing organic ions to solid-phase reagents at ambient surfaces results in heterogeneous ion/surface reactions. The electrosprayed droplets were driven pneumatically in ambient air and then electrically directed onto a surface coated with reagent. Using this reactive soft landing approach, acid-catalyzed Girard condensation was achieved at an ambient surface by directing droplets containing Girard T ions onto a dry keto-steroid. The charged droplet/surface reaction was much more efficient than the corresponding bulk solution-phase reaction performed on the same scale. The increase in product yield is ascribed to solvent evaporation, which causes moderate pH values in the starting droplet to reach extreme values and increases reagent concentrations. Comparisons are made with an experiment in which the droplets were pneumatically accelerated onto the ambient surface (reactive desorption electrospray ionization, DESI). The same reaction products were observed but differences in spatial distribution were seen associated with the “splash” of the high velocity DESI droplets. In a third type of experiment, the reactions of charged droplets with vapor phase reagents were examined by allowing electrosprayed droplets containing a reagent to intercept the headspace vapor of an analyte. Deposition onto a collector surface and mass analysis showed that samples in the vapor phase were captured by the electrospray droplets, and that instantaneous derivatization of the captured sample is possible in the open air. The systems examined under this condition included the derivatization of cortisone vapor with Girard T and that of 4-phenylpyridine N-oxide and 2-phenylacetophenone vapors with ethanolamine.
Co-reporter:Marion Girod, Encarnacion Moyano, Dahlia I. Campbell and R. Graham Cooks  
Chemical Science 2011 vol. 2(Issue 3) pp:501-510
Publication Date(Web):06 Dec 2010
DOI:10.1039/C0SC00416B
Functional group derivatization reactions occur in the course of microdroplet/surface collisions in the ambient ionization process of desorption electrospray ionization (DESI). The unique environment in the microdroplet causes rate enhancements of as much as several orders of magnitude in typical bimolecular reactions that proceed through either cationic or anionic intermediates. The environment in the evaporating charged microdroplet differs from that of the bulk: (i) the pH of the solution moves towards the extremes, (ii) the concentrations of the reagents increase, (iii) the relative surface area increases and (iv) collision frequencies increase. The rates of acid-catalyzed reactions, such as the reaction of Girard T reagent with ketosteroids, increase with decreasing pH in positively-charged microdroplets compared to the bulk solution rates. Similarly, the increased pH in evaporating negatively-charged microdroplets contributes to an increase in the rates of base-catalyzed Michael reactions over those recorded under bulk solution conditions. The amount of product formed depends on the reaction time and the droplet size. Nanoelectrospray ionization generates larger droplets than the secondary droplets of DESI so it does not show significant product formation in the analysis period and can be used to analyze products of the DESI experiments. When secondary microdroplets (ca. 1 micron diameter) are generated either by spraying a homogeneous solution of both reagents against an inert surface (reactive DESI) or when a solution of Girard T reagent is sprayed against a solid surface bearing the ketosteroid significant amounts of product are generated. In the case of the Michael reaction with cinnamic acid an alternative dehydrogenated reaction product is formed under microdroplet conditions. Some parallels between the phenomenon reported here and the rate acceleration seen in sonochemistry are noted. The potential value of mass spectrometry in establishing conditions that enhance reaction rates is also indicated. It is possible that these observations will assist in the selection of reaction conditions involving the use of charged microdroplets to enhance the rates of ordinary bulk chemical reactions, especially those involving strong steric hindrance.
Co-reporter:Anyin Li, He Wang, Zheng Ouyang and R. Graham Cooks  
Chemical Communications 2011 vol. 47(Issue 10) pp:2811-2813
Publication Date(Web):01 Feb 2011
DOI:10.1039/C0CC05513A
Non-polar solvents like hexane allow ionization of insoluble drugs, peptides, nucleotides and phospholipids as solids from paper. Ambient ionization is achieved simply by application of a high voltage to the wet paper. Transport and ionization mechanisms are discussed, including the possibility of field desorption from dendritic structures formed on the paper.
Co-reporter:Allison L. Dill, Livia S. Eberlin, Demian R. Ifa and R. Graham Cooks  
Chemical Communications 2011 vol. 47(Issue 10) pp:2741-2746
Publication Date(Web):16 Dec 2010
DOI:10.1039/C0CC03518A
Imaging mass spectrometry (MS) allows a remarkable range of measurements including diagnosis of disease state of tissue based on detailed information on its chemical constituents, especially lipids and proteins. The recent emergence of ambient ionization allows imaging in the open environment without sample preparation. In this review, we briefly describe the history of imaging MS highlighting its main techniques and applications. We also demonstrate how the detailed molecular information obtained by imaging MS makes this technique suitable for a range of forensic and clinical applications with the potential to be successfully developed all the way to intra-surgical practice.
Co-reporter:Jobin Cyriac, Guangtao Li, and R. Graham Cooks
Analytical Chemistry 2011 Volume 83(Issue 13) pp:5114
Publication Date(Web):June 2, 2011
DOI:10.1021/ac200118f
We report implementation of two powerful characterization tools, in situ secondary ion mass spectrometry (SIMS) and ex situ surface enhanced Raman spectroscopy (SERS), in analyzing surfaces modified by ion soft landing (SL). Cations derived from Rhodamine 6G are soft landed onto Raman-active silver colloidal substrates and detected using SERS. Alternatively and more conveniently, high-quality SERS data are obtained by spin coating a silver colloidal solution over the modified surface once SL is complete. Well-defined SERS features are observed for Rhodamine 6G in as little as 15 min of ion deposition. Deposition of ∼3 pmo1 gave high-quality SERS spectra with characteristic spectroscopic responses being derived from just ∼0.5 fmol of material. Confocal SERS imaging allowed the enhancement to be followed in different parts of deposited dried droplets on surfaces. Characteristic changes in Raman spectral features occur when Rhodamine 6G is deposited under conditions that favor gas-phase ion fragmentation. Simultaneous deposition of both the intact dye and its fragment ion occurs and is confirmed by SIMS analysis. The study was extended to other Raman active surfaces, including Au nanostar and Au coated Ni nanocarpet surfaces and to SL of other molecules including fluorescein and methyl red. Overall, the results suggest that combination of SERS and SIMS measurements are effective in the characterization of surfaces produced by ion SL with significantly enhanced molecular specificity.
Co-reporter:Jiangjiang Liu, He Wang, R. Graham Cooks, and Zheng Ouyang
Analytical Chemistry 2011 Volume 83(Issue 20) pp:7608
Publication Date(Web):September 14, 2011
DOI:10.1021/ac2020273
The chemical constituents of intact plant material, including living plants, are examined by a simple spray method that provides real-time information on sugars, amino acids, fatty acids, lipids, and alkaloids. The experiment is applicable to various plant parts and is demonstrated for a wide variety of species. An electrical potential is applied to the plant and its natural sap, or an applied solvent generates an electrospray that carries endogenous chemicals into an adjacent benchtop or miniature mass spectrometer. The sharp tip needed to create a high electric field can be either natural (e.g., bean sprout) or a small nick can be cut in a leaf, fruit, bark, etc. Stress-induced changes in glucosinolates can be followed on the minute time scale in several plants, including potted vegetables. Differences in spatial distributions and the possibility of studying plant metabolism are demonstrated.
Co-reporter:Livia S. Eberlin, Xiaohui Liu, Christina R. Ferreira, Sandro Santagata, Nathalie Y.R. Agar, and R. Graham Cooks
Analytical Chemistry 2011 Volume 83(Issue 22) pp:8366
Publication Date(Web):October 5, 2011
DOI:10.1021/ac202016x
Imaging mass spectrometry (MS) is a powerful technique for mapping the spatial distributions of a wide range of chemical compounds simultaneously from a tissue section. Co-localization of the distribution of individual molecular species, including particular lipids and proteins, and correlation with the morphological features of a single tissue section are highly desirable for comprehensive tissue analysis and disease diagnosis. We now report on the use, in turn, of desorption electrospray ionization (DESI), matrix assisted laser desorption ionization (MALDI), and then optical microscopy to image lipid and protein distributions in a single tissue section. This is possible through the use of histologically compatible DESI solvent systems, which allow for sequential analyses of the same section by DESI then MALDI. Hematoxylin and eosin (H&E) staining was performed on the same section after removal of the MALDI matrix. This workflow allowed chemical information to be unambiguously matched to histological features in mouse brain tissue sections. The lipid sulfatide (24:1), detected at m/z 888.8 by DESI imaging, was colocalized with the protein MBP isoform 8, detected at m/z 14117 by MALDI imaging, in regions corresponding to the corpus callosum substructure of the mouse brain, as confirmed in the H&E images. Correlation of lipid and protein distributions with histopathological features was also achieved for human brain cancer samples. Higher tumor cell density was observed in regions demonstrating higher relative abundances of oleic acid, detected by DESI imaging at m/z 281.4, and the protein calcyclin, detected by MALDI at m/z 10085, for a human glioma sample. Since correlation between molecular signatures and disease state can be achieved, we expect that this methodology will significantly enhance the value of MS imaging in molecular pathology for diagnosis.
Co-reporter:Jiangjiang Liu, R. Graham Cooks, and Zheng Ouyang
Analytical Chemistry 2011 Volume 83(Issue 24) pp:9221
Publication Date(Web):November 21, 2011
DOI:10.1021/ac202626f
Needle biopsy is a routine medical procedure for examining tissue or biofluids for the presence of disease using standard methods of pathology. In this work, spray ionization directly from tissue in the biopsy needle is shown to provide highly specific molecular information through mass spectrometry analysis. The data are available within a minute after the tissue biopsy, a time scale that allows immediate medical decisions to be made. This method has been performed for tissues in a variety of organs including brain, liver, kidney, adrenal gland, stomach, and spinal cord. Amino acids, hormones, fatty acids, anesthetics, and phospholipids are detected from the tissues and identified using exact mass measurement and tandem mass spectrometry. Lipid profiles are rich in information and, as in imaging MS methods, they have the potential to serve to distinguish diseased from healthy tissue. Needle biopsies allow a crude form of depth profiling that is demonstrated with the analysis of tissue samples taken by a needle inserted into a porcine kidney at various depths.
Co-reporter:Juan F. Garcia-Reyes, Jason D. Harper, Gary A. Salazar, Nicholas A. Charipar, Zheng Ouyang, and R. Graham Cooks
Analytical Chemistry 2011 Volume 83(Issue 3) pp:1084
Publication Date(Web):December 21, 2010
DOI:10.1021/ac1029117
Detection of explosives is important for public safety. A recently developed low-temperature plasma (LTP) probe for desorption and ionization of samples in the ambient environment ( Anal. Chem. 2008, 80, 9097) is applied in a comprehensive evaluation of analytical performance for rapid detection of 13 explosives and explosives-related compounds. The selected chemicals [pentaerythritol tetranitrate (PETN), trinitrotoluene (TNT), cyclo-1,3,5-trimethylenetrinitramine (RDX), tetryl, cyclo-1,3,5,7-tetramethylenetetranitrate (HMX), hexamethylene triperoxide diamine (HMTD), 2,4-dinitrotoluene, 1,3-dinitrobenzene, 1,3,5-trinitrobenzene, 2-amino-4,6-dinitrotoluene, 4-amino-2,6-dinitrotoluene, 2,6-dinitrotoluene, and 4-nitrotoluene) were tested at levels in the range 1 pg−10 ng. Most showed remarkable sensitivity in the negative-ion mode, yielding limits of detection in the low picogram range, particularly when analyzed from a glass substrate heated to 120 °C. Ions typically formed from these molecules (M) by LTP include [M + NO2]−, [M]−, and [M − NO2]−. The LTP-mass spectrometry methodology displayed a linear signal response over three orders of magnitude of analyte amount for the studied explosives. In addition, the effects of synthetic matrices and different types of surfaces were evaluated. The data obtained demonstrate that LTP-MS allows detection of ultratrace amounts of explosives and confirmation of their identity. Tandem mass spectrometry (MS/MS) was used to confirm the presence of selected explosives at low levels; for example, TNT was confirmed at absolute levels as low as 0.6 pg. Linearity and intra- and interday precision were also evaluated, yielding results that demonstrate the potential usefulness and ruggedness of LTP-MS for the detection of explosives of different classes. The use of ion/molecule reactions to form adducts with particular explosives such as RDX and HMX was shown to enhance the selectivity and specificity. This was accomplished by merging the discharge gas with an appropriate reagent headspace vapor (e.g., from a 0.2% trifluoracetic acid solution).
Co-reporter:Keyong Hou, Wei Xu, Jian Xu, R. Graham Cooks, and Zheng Ouyang
Analytical Chemistry 2011 Volume 83(Issue 5) pp:1857
Publication Date(Web):February 7, 2011
DOI:10.1021/ac102962e
A new sampling wand concept for ion trap mass spectrometers equipped with discontinuous atmospheric pressure interfaces (DAPI) has been implemented. The ion trap/DAPI combination facilitates the operation of miniature mass spectrometers equipped with ambient ionization sources. However, in the new implementation, instead of transferring ions pneumatically from a distant source, the mass analyzer and DAPI are separated from the main body of the mass spectrometer and installed at the end of a 1.2 m long wand. During ion introduction, ions are captured in the ion trap while the gas in which they are contained passes through the probe and is pumped away. The larger vacuum volume due to the extended wand improves the mass analysis sensitivity. The wand was tested using a modified hand-held ion trap mass spectrometer without additional power or pumping being required. Improved sensitivity was obtained as demonstrated with nano-electrospray ionization (ESI), atmospheric pressure chemical ionization (APCI), and low temperature plasma (LTP) probe analysis of liquid, gaseous, and solid samples, respectively.
Co-reporter:Abraham K. Badu-Tawiah, Chunping Wu, and R. Graham Cooks
Analytical Chemistry 2011 Volume 83(Issue 7) pp:2648
Publication Date(Web):March 16, 2011
DOI:10.1021/ac102940q
Ambient ion soft landing, a process in which polyatomic ions are deposited from air onto a surface at a specified location under atmospheric pressure, is described. Ions generated by electrospray ionization are passed pneumatically through a heated metal drying tube, their ion polarity is selected using ion deflectors, and the dry selected ions are soft-landed onto a selected surface. Unlike the corresponding vacuum soft-landing experiment, where ions are mass-selected and soft-landed within a mass spectrometer, here the ions to be deposited are selected through the choice of a compound that gives predominantly one ionic species upon ambient ionization; no mass analysis is performed during the soft landing experiment. The desired dry ions, after electrical separation from neutrals and counterions, are deposited on a surface. Characterization of the landed material was achieved by dissolution and analysis using mass spectrometry or spectrofluorimetry. The treated surface was also characterized using fluorescence microscopy, which allowed surfaces patterned with fluorescent compounds to be imaged. The pure dry ions were used as reagents in heterogeneous ion/surface reactions including the reaction of pyrylium cations with d-lysine to form the N-substituted pyridinium cation. The charged microdroplets associated with incompletely dried ions could be selected for soft landing or surface reaction by choice of the temperature of a drying tube inserted between the ion source and the electrical ion deflectors.
Co-reporter:J. Isabella Zhang, W. Andy Tao, and R. Graham Cooks
Analytical Chemistry 2011 Volume 83(Issue 12) pp:4738
Publication Date(Web):May 3, 2011
DOI:10.1021/ac1030946
Unsaturated fatty acids and esters can be oxidized in situ during ionization using a low temperature plasma (LTP) probe. The discharge generates ozone from air that reacts with and cleaves olefins. The molecular ions of the resulting acid/ester oxidation products are present in the full scan mass spectra and are confirmed by exact mass measurements. The fragmentation information can be used to assign double bond positions. We have successfully applied this strategy to a range of mono-/polyunsaturated fatty acids and fatty acid methyl/ethyl esters to assign their double bond locations. The procedure allows rapid and direct identification of double bond positions in situ at atmospheric pressure without sample preparation prior to mass spectrometric analysis. Microbial fatty acid ethyl ester (FAEE) mixtures from complex bacterial samples were directly analyzed by this method. Structural confirmation of their diagnostic ions by using exact mass measurements and tandem mass spectrometry confirms double bond positions in unsaturated bacterial FAEEs.
Co-reporter:Thomas Müller, Sheran Oradu, Demian R. Ifa, R. Graham Cooks, and Bernhard Kräutler
Analytical Chemistry 2011 Volume 83(Issue 14) pp:5754
Publication Date(Web):June 15, 2011
DOI:10.1021/ac201123t
The ambient mass spectrometry technique, desorption electrospray ionization mass spectrometry (DESI-MS), is applied for the rapid identification and spatially resolved relative quantification of chlorophyll degradation products in complex senescent plant tissue matrixes. Polyfunctionalized nonfluorescent chlorophyll catabolites (NCCs), the “final” products of the chlorophyll degradation pathway, are detected directly from leaf tissues within seconds and structurally characterized by tandem mass spectrometry (MS/MS) and reactive-DESI experiments performed in situ. The sensitivity of DESI-MS analysis of these compounds from degreening leaves is enhanced by the introduction of an imprinting technique. Porous polytetrafluoroethylene (PTFE) is used as a substrate for imprinting the leaves, resulting in increased signal intensities compared with those obtained from direct leaf tissue analysis. This imprinting technique is used further to perform two-dimensional (2D) imaging mass spectrometry by DESI, producing well-resolved images of the spatial distribution of NCCs in senescent leaf tissues.
Co-reporter:Marion Girod, Yunzhou Shi, Ji-Xin Cheng, and R. Graham Cooks
Analytical Chemistry 2011 Volume 83(Issue 1) pp:207
Publication Date(Web):December 13, 2010
DOI:10.1021/ac102264z
Desorption electrospray ionization (DESI) mass spectrometry (MS) is used in an imaging mode to interrogate the lipid profiles of 15 μm thin tissue cross sections of injured rat spinal cord and normal healthy tissue. Increased relative intensities of fatty acids, diacylglycerols, and lysolipids (between +120% and +240%) as well as a small decrease in intensities of lipids (−30%) were visualized in the lesion epicenter and adjacent areas after spinal cord injury. This indicates the hydrolysis of lipids during the demyelination process due to activation of phospholipase A2 enzyme. In addition, signals corresponding to oxidative degradation products, such as prostaglandin and hydroxyeicosatetraenoic acid, exhibited increased signal intensity by a factor of 2 in the negative ion mode in lesions relative to the normal healthy tissue. Analysis of malondialdehyde, a product of lipid peroxidation and marker of oxidative stress, was accomplished in the ambient environment using reactive DESI mass spectrometry imaging. This was achieved by electrospraying reagent solution containing dinitrophenylhydrazine as high-velocity charged droplets onto the tissue section. The hydrazine reacts selectively and rapidly with the carbonyl groups of malondialdehyde, and signal intensity of twice the intensity was detected in the lesions compared to healthy spinal cord. With a small amount of tissue sample, DESI-MS imaging provides information on the composition and distribution of specific compounds (limited by the occurrence of isomeric lipids with very similar fragmentation patterns) in lesions after spinal cord injury in comparison with normal healthy tissue allowing identification of the extent of the lesion and its repair.
Co-reporter:J. Isabella Zhang, Anthony B. Costa, W. Andy Tao and R. Graham Cooks  
Analyst 2011 vol. 136(Issue 15) pp:3091-3097
Publication Date(Web):27 Jun 2011
DOI:10.1039/C0AN00940G
Low temperature plasma mass spectrometry (LTP-MS) was employed to detect fatty acid ethyl esters (FAEE) from bacterial samples directly. Positive ion mode FAEE mass spectrometric profiles of sixteen different bacterial samples were obtained without extraction or other sample preparation. In the range m/z 200–300, LTP mass spectra show highly reproducible and characteristic patterns. To identify the FAEE's associated with the characteristic peaks, accurate masses were recorded in the full scan mode using an LTQ/Orbitrap instrument, and tandem mass spectrometry was performed. Data were examined by principal component analysis (PCA) to determine the degree of differentiation possible amongst different bacterial species. Gram-positive and gram-negative bacteria are readily distinguished, and 11 out of 13 Salmonella strains show distinctive patterns. Growth media effects are observed but do not interfere with species recognition based on the PCA results.
Co-reporter:Anthony B. Costa and R. Graham Cooks  
Physical Chemistry Chemical Physics 2011 vol. 13(Issue 3) pp:877-885
Publication Date(Web):22 Nov 2010
DOI:10.1039/C0CP01402H
Serine “magic-number” clusters have attracted substantial experimental and theoretical interest since their discovery. Serine undergoes marked chiral enrichment upon sublimation, which has been associated with the homochiral selectivity of the octamer. This process has been implicated in one possible mechanism leading to the origin of biological homochirality. While the octamer is the best known of the serine clusters, here we focus on the tetramer, the smallest serine cluster known to exhibit homochiral preference. This choice is based on its greater simplicity and tractability with accessible computational resources. Basin-hopping molecular dynamics simulations coupled to density functional theory calculations yield a “structural landscape” for low-lying configurations on the potential energy surface. The full range of enantiomeric compositions and charge states is investigated. Global energy minimum serine tetramers consist of a cage structure bonded by zwitterionic terminal groups. The participation of the serine hydroxyl side chains in hydrogen bonds with adjacent monomers drives the homochiral selectivity of serine tetramers. The configuration of the hydrogen bonding network is strongly dependent on enantiomeric composition and charge state. Smaller cations are incorporated into the center of the tetramer cage and effectively disable all side chain hydrogen bonding, while larger cations appear not to incorporate into the tetramer cage and are stabilized outside only in the homochiral case. The current theoretical data requires the introduction of a kinetic barrier to complete the model, limiting rearrangement from the basic cage configuration in some cases, which is discussed and probed directly by doubly-nudged elastic band transition state searches. These calculations elucidate a large barrier for reorganization of the cage, completing the theoretical understanding of the tetramers.
Co-reporter:Wen-Ping Peng, Grant E. Johnson, Ivy C. Fortmeyer, Peng Wang, Omar Hadjar, R. Graham Cooks and Julia Laskin  
Physical Chemistry Chemical Physics 2011 vol. 13(Issue 1) pp:267-275
Publication Date(Web):12 Nov 2010
DOI:10.1039/C0CP01457E
Soft landing (SL) of mass-selected ions is used to transfer catalytically-active metal complexes complete with organic ligands from the gas phase onto an inert surface. This is part of an effort to prepare materials with defined active sites and thus achieve molecular design of surfaces in a highly controlled way. Solution-phase electrochemical studies have shown that VIVO(salen) reacts in the presence of acid to form VVO(salen)+ and the deoxygenated VIII(salen)+ complex—a key intermediate in the four electron reduction of O2 by vanadium–salen. In this work, the VVO(salen)+ and [NiII(salen) + H]+ complexes were generated by electrospray ionization and mass-selected before being deposited onto an inert fluorinated self-assembled monolayer (FSAM) surface on gold. A time dependence study after ion deposition showed loss of O from VVO(salen)+ forming VIII(salen)+ over a four-day period, indicating a slow interfacial reduction process. Similar results were obtained when other protonated molecules were co-deposited with VVO(salen)+ on the FSAM surface. In all these experiments oxidation of the VIII(salen)+ product occurred upon exposure to oxygen or to air. The cyclic regeneration of VVO(salen)+ upon exposure to molecular oxygen and its subsequent reduction to VIII(salen)+ in vacuum completes the catalytic cycle of O2reduction by the immobilized vanadium–salen species. Moreover, our results represent the first evidence of formation of reactive organometallic complexes on substrates in the absence of solvent. Remarkably, deoxygenation of the oxo-vanadium complex, previously observed only in highly acidic non-aqueous solvents, occurs on the surface in the UHV environment using an acid which is deposited into the inert monolayer. This acid can be a protonated metal complex, e.g. [NiII(salen) + H]+, or an organic acid such as protonated diaminododecane.
Co-reporter:Ewa Sokol, Robert J. Noll, R. Graham Cooks, Luther W. Beegle, Hugh I. Kim, Isik Kanik
International Journal of Mass Spectrometry 2011 Volume 306(2–3) pp:187-195
Publication Date(Web):15 September 2011
DOI:10.1016/j.ijms.2010.10.019
We report on the use of a small light-weight mass spectrometer (MS) for chemical analysis of organic material directly from solution or from the solid state with potential value in future planetary missions. The mass spectrometer used in the experiments reported here is handheld and controlled from a laptop computer through custom software. Detection and identification of small organic molecules, including some that might be prebiotics, was achieved using methods relevant to in situ and remote sensing applications. The miniature MS was equipped with a discontinuous atmospheric pressure interface (DAPI) and a home-built electrosonic spray ionization (ESSI) source. Aqueous solutions of molecules of interest were examined using the ESSI technique, while desorption electrospray ionization (DESI) was applied to examine solid samples. The system performance was characterized by direct analysis of analytes belonging to several compound classes including biotic and abiotic amino acids, purines, pyrimidines, nucleosides and peptides. Detection limits in the sub-ppm range for solutions were achieved with the atmospheric pressure sampling/ionization interface. Tandem mass spectrometry (MS2) was successfully applied to confirm trace detection of target compounds in mixtures. Multiple stage (MSn) analysis, where n = 3–5, was employed for molecular structure confirmation and to demonstrate the high chemical specificity as well as the sensitivity of the instrumentation. The use of improved versions of this type of mass spectrometer on exploration missions could provide detailed chemical information on organic materials in physical states currently difficult to access. The high sensitivity and specificity, combined with rapid detection and the absence of requirements for sample preparation are encouraging features of the instrumentation.Graphical abstractPortable mass spectrometer, with potential value for planetary missions, was used to detect and identify amino acids, purines, pyrimidines, nucleosides and peptides at sub-part per million levels in solution using MS and MSn.Research highlights▶ Small light-weight mass spectrometer (MS) used for chemical analysis of organic material directly from solution or from the solid state. ▶ Miniature MS performance characterized by direct analysis of several target compound classes including biotic and abiotic amino acids, purines, pyrimidines, nucleosides and peptides. ▶ High specificity of the miniature MS system demonstrated using tandem MS and multiple MS stages (up to MS5). ▶ Tandem mass spectrometry (MS2) successfully applied to confirm trace detection of target compounds in mixtures. ▶ Multiple stage (MSn) analysis, where n = 3–5, employed for molecular structure confirmation and to demonstrate the high chemical specificity as well as the sensitivity of the instrumentation.
Co-reporter:Paul Hendricks, Jason Duncan, Robert J. Noll, Zheng Ouyang, R. Graham Cooks
International Journal of Mass Spectrometry 2011 Volume 305(Issue 1) pp:69-73
Publication Date(Web):1 August 2011
DOI:10.1016/j.ijms.2011.05.009
Reduced power operation of a mass analyzer with minimum loss of spectral resolution and mass range is desirable in portable instruments. Miniaturizing quadrupole-based ion traps can be especially worthwhile since the RF amplitude necessary for mass analysis scales with the square of the analyzer dimensions. The performance of a miniature, stainless steel, rectilinear ion trap (RIT) with dimensions of 1.66 mm × 1.43 mm (x0 and y0 respectively) is characterized by sampling externally generated ions and performing mass analysis without benefit of differential pumping to simulate conditions in a miniature system. This system is capable of detecting analyte ions of up to m/z 1250 at operating voltages of 610 V0-p (drive frequency of 1.105 MHz), and with spectral resolution on the order of 2 Th (FWHM) across the entire mass range. The ability to acquire structural information through tandem MS is also demonstrated.Graphical abstractHighlights► Design and fabrication of a miniaturized rectilinear ion trap mass analyzer. ► Mass analyzer performance characterization for mass resolution, mass range, operating pressure, and operating voltage. ► Demonstration of tandem MS capabilities.
Co-reporter:J. Isabella Zhang, Nari Talaty, Anthony B. Costa, Yu Xia, W. Andy Tao, Rebecca Bell, John H. Callahan, R. Graham Cooks
International Journal of Mass Spectrometry 2011 Volume 301(1–3) pp:37-44
Publication Date(Web):30 March 2011
DOI:10.1016/j.ijms.2010.06.014
Desorption electrospray ionization (DESI) was employed to measure lipids directly from sixteen bacterial samples without extraction or other sample preparation. Differentiation of different bacterial species and some sub-species was achieved using either the positive or the negative ion mode DESI mass spectra covering the mass/charge range up to m/z 1000. The data were confirmed by electrospray mass spectrometry (ESI-MS) of lipid extracts from the same bacterial samples. Although the signals were lower, the quality of the direct ionization DESI spectra compared favorably with that of the ESI spectra extracts prepared using chloroform/methanol. The use of unit mass resolution in these experiments allows for overlaps of nominally isobaric and isomeric lipids at particular m/z values. Tandem mass spectrometry was performed to validate the presence of particular lipids falling into several classes of phospholipids, including phosphatidylethanolamines (PE), phosphatidylglycerols (PG) and lysophospholipids. In addition, lysyl-phosphatidylglycerol (LPG) and lipopeptides were observed in the cases of gram-positive bacteria. DESI-MS lipid profiling was applied to the characterization of four different bacterial species including thirteen Salmonella strains. Two bacterial samples Escherichia coli K-12 and Salmonella typhimurium INSP24 were also grown in three different media. Data were compared using principal component analysis (PCA), which indicated that the different species are readily distinguished and that different growth media do not prevent bacterial species differentiation in the cases examined. Several different Salmonella strains are also distinguishable from each other based on the PCA results.Synopsis: Polar lipids from intact bacterial samples directly detected by DESI-MS give highly similar spectra to those of lipid extracts examined by ESI-MS.
Co-reporter:Guangming Huang;Guangtao Li;Jason Ducan;Zheng Ouyang ; R. Graham Cooks
Angewandte Chemie International Edition 2011 Volume 50( Issue 11) pp:2503-2506
Publication Date(Web):
DOI:10.1002/anie.201007819
Co-reporter:Guangming Huang;Guangtao Li;Jason Ducan;Zheng Ouyang ; R. Graham Cooks
Angewandte Chemie 2011 Volume 123( Issue 11) pp:2551-2554
Publication Date(Web):
DOI:10.1002/ange.201007819
Co-reporter:Guangming Huang;Guangtao Li ; R. Graham Cooks
Angewandte Chemie 2011 Volume 123( Issue 42) pp:10081-10084
Publication Date(Web):
DOI:10.1002/ange.201103687
Co-reporter:Guangming Huang;Guangtao Li ; R. Graham Cooks
Angewandte Chemie International Edition 2011 Volume 50( Issue 42) pp:9907-9910
Publication Date(Web):
DOI:10.1002/anie.201103687
Co-reporter:Nicholas E. Manicke, Qian Yang, He Wang, Sheran Oradu, Zheng Ouyang, R. Graham Cooks
International Journal of Mass Spectrometry 2011 300(2–3) pp: 123-129
Publication Date(Web):
DOI:10.1016/j.ijms.2010.06.037
Co-reporter:Livia S. Eberlin;Dr. Christina R. Ferreira;Dr. Allison L. Dill;Dr. Demian R. Ifa;Dr. Liang Cheng; R. Graham Cooks
ChemBioChem 2011 Volume 12( Issue 14) pp:2129-2132
Publication Date(Web):
DOI:10.1002/cbic.201100411
Co-reporter:Nicholas Edward Manicke;Paul Abu-Rabie
Journal of The American Society for Mass Spectrometry 2011 Volume 22( Issue 9) pp:1501-1507
Publication Date(Web):2011 September
DOI:10.1007/s13361-011-0177-x
A method is presented for the direct quantitative analysis of therapeutic drugs from dried blood spot samples by mass spectrometry. The method, paper spray mass spectrometry, generates gas phase ions directly from the blood card paper used to store dried blood samples without the need for complex sample preparation and separation; the entire time for preparation and analysis of blood samples is around 30 s. Limits of detection were investigated for a chemically diverse set of some 15 therapeutic drugs; hydrophobic and weakly basic drugs, such as sunitinib, citalopram, and verapamil, were found to be routinely detectable at approximately 1 ng/mL. Samples were prepared by addition of the drug to whole blood. Drug concentrations were measured quantitatively over several orders of magnitude, with accuracies within 10% of the expected value and relative standard deviation (RSD) of around 10% by prespotting an internal standard solution onto the paper prior to application of the blood sample. We have demonstrated that paper spray mass spectrometry can be used to quantitatively measure drug concentrations over the entire therapeutic range for a wide variety of drugs. The high quality analytical data obtained indicate that the technique may be a viable option for therapeutic drug monitoring.
Co-reporter:Allison L. Dill;Livia S. Eberlin;Dr. Anthony B. Costa;Dr. Cheng Zheng;Dr. Demian R. Ifa;Dr. Liang Cheng;Dr. Timothy A. Masterson;Dr. Michael O. Koch; Olga Vitek; R. Graham Cooks
Chemistry - A European Journal 2011 Volume 17( Issue 10) pp:2897-2902
Publication Date(Web):
DOI:10.1002/chem.201001692

Abstract

Diagnosis of human bladder cancer in untreated tissue sections is achieved by using imaging data from desorption electrospray ionization mass spectrometry (DESI-MS) combined with multivariate statistical analysis. We use the distinctive DESI-MS glycerophospholipid (GP) mass spectral profiles to visually characterize and formally classify twenty pairs (40 tissue samples) of human cancerous and adjacent normal bladder tissue samples. The individual ion images derived from the acquired profiles correlate with standard histological hematoxylin and eosin (H&E)-stained serial sections. The profiles allow us to classify the disease status of the tissue samples with high accuracy as judged by reference histological data. To achieve this, the data from the twenty pairs were divided into a training set and a validation set. Spectra from the tumor and normal regions of each of the tissue sections in the training set were used for orthogonal projection to latent structures (O-PLS) treated partial least-square discriminate analysis (PLS-DA). This predictive model was then validated by using the validation set and showed a 5 % error rate for classification and a misclassification rate of 12 %. It was also used to create synthetic images of the tissue sections showing pixel-by-pixel disease classification of the tissue and these data agreed well with the independent classification that uses histological data by a certified pathologist. This represents the first application of multivariate statistical methods for classification by ambient ionization although these methods have been applied previously to other MS imaging methods. The results are encouraging in terms of the development of a method that could be utilized in a clinical setting through visualization and diagnosis of intact tissue.

Co-reporter:Allison L. Dill;Livia S. Eberlin
Analytical and Bioanalytical Chemistry 2011 Volume 401( Issue 6) pp:
Publication Date(Web):2011 October
DOI:10.1007/s00216-011-5249-z
There has been a recent surge in applications of mass spectrometry (MS) to tissue analysis, particularly lipid-based tissue imaging using ambient ionization techniques. This recent growth highlights the need to examine the effects of sample handling, storage conditions, and experimental protocols on the quality of the data obtained. Variables such as time before freezing after organ removal, storage time at −80 °C, time stored at room temperature, heating, and freeze/thaw cycles were investigated for their effect on the data quality obtained in desorption electrospray ionization (DESI)-MS using mouse brain. In addition, analytical variables such as tissue thickness, drying times, and instrumental conditions were also examined for their impact on DESI-MS data. While no immediate changes were noted in the DESI-MS lipid profiles of the mouse brain tissue after spending 1 h at room temperature when compared to being frozen immediately following removal, minor changes were noted between the tissue samples after 7 months of storage at −80 °C. In tissue sections stored at room temperature, degradation was noted in 24 h by the appearance of fatty acid dimers, which are indicative of high fatty acid concentrations, while in contrast, those sections stored at −80 °C for 7 months showed no significant degradation. Tissue sections were also subjected to up to six freeze/thaw cycles and showed increasing degradation following each cycle. In addition, tissue pieces were subjected to 50 °C temperatures and analyzed at specific time points. In as little as 2 h, degradation was observed in the form of increased fatty acid dimer formation, indicating that enzymatic processes forming free fatty acids were still active in the tissue. We have associated these dimers with high concentrations of free fatty acids present in the tissue during DESI-MS experiments. Analytical variables such as tissue thickness and time left to dry under nitrogen were also investigated, with no change in the resulting profiles at thickness from 10 to 25 μm and with optimal signal obtained after just 20 min in the dessicator. Experimental conditions such as source parameters, spray solvents, and sample surfaces are all shown to impact the quality of the data. Inter-section (relative standard deviation (%RSD), 0.44–7.2%) and intra-sample (%RSD, 4.0–8.0%) reproducibility data show the high quality information DESI-MS provides. Overall, the many variables investigated here showed DESI-MS to be a robust technique, with sample storage conditions having the most effect on the data obtained, and with unacceptable sample degradation occurring during room temperature storage.
Co-reporter:Timothy A. Masterson;Allison L. Dill
Journal of The American Society for Mass Spectrometry 2011 Volume 22( Issue 8) pp:1326-1333
Publication Date(Web):2011 August
DOI:10.1007/s13361-011-0134-8
Desorption electrospray ionization mass spectrometry (DESI-MS) has been successfully used to discriminate between normal and cancerous human tissue from different anatomical sites. On the basis of this, DESI-MS imaging was used to characterize human seminoma and adjacent normal tissue. Seminoma and adjacent normal paired human tissue sections (40 tissues) from 15 patients undergoing radical orchiectomy were flash frozen in liquid nitrogen and sectioned to 15 μm thickness and thaw mounted to glass slides. The entire sample was two-dimensionally analyzed by the charged solvent spray to form a molecular image of the biological tissue. DESI-MS images were compared with formalin-fixed, hematoxylin and eosin (H&E) stained slides of the same material. Increased signal intensity was detected for two seminolipids [seminolipid (16:0/16:0) and seminolipid (30:0)] in the normal tubule testis tissue; these compounds were undetectable in seminoma tissue, as well as from the surrounding fat, muscle, and blood vessels. A glycerophosphoinositol [PI(18:0/20:4)] was also found at increased intensity in the normal testes tubule tissue when compared with seminoma tissue. Ascorbic acid (i.e., vitamin C) was found at increased amounts in seminoma tissue when compared with normal tissue. DESI-MS analysis was successfully used to visualize the location of several types of molecules across human seminoma and normal tissues. Discrimination between seminoma and adjacent normal testes tubules was achieved on the basis of the spatial distributions and varying intensities of particular lipid species as well as ascorbic acid. The increased presence of ascorbic acid within seminoma compared with normal seminiferous tubules was previously unknown.
Co-reporter:Ewa Sokol;Ayanna U. Jackson
Central European Journal of Chemistry 2011 Volume 9( Issue 5) pp:790-797
Publication Date(Web):2011 October
DOI:10.2478/s11532-011-0065-z
Desorption electrospray ionization (DESI), an established ambient ionization method in mass spectrometry (MS) for the analysis of organic compounds, is applied here to trace detection of inorganic salts, including inorganic oxidants. In-situ surface analysis of targeted compounds, including nitrogen-, halogen- and sulfur-salts, down to sub-nanogram levels, was performed using DESI-MS. Successful experiments were carried out in both the negative and the positive ion modes; simple anions and cations as well as small cluster ions were observed. Various surfaces are examined and surface porosity effects were briefly explored. Absolute detection limits on porous polytetrafluoroethylene (PTFE) of 120 pg (surface concentration 0.07 ng mm−2) and 50 pg (surface concentration 0.03 ng mm−2), were achieved for sodium chlorate and sodium perchlorate, respectively. The compounds of interest were examined in the presence of a hydrocarbon mixture to assess matrix effects: only a two- or three-fold decrease in the target ion intensity was observed. Commercial fireworks were analyzed to determine perchlorate salts in complex mixtures. This work demonstrates the potential applicability of ambient ionization mass spectrometry to forensic investigations involving improvised explosives. Open image in new window
Co-reporter:Giuseppe Paglia, Demian R. Ifa, Chunping Wu, Gaetano Corso and R. Graham Cooks
Analytical Chemistry 2010 Volume 82(Issue 5) pp:1744
Publication Date(Web):February 3, 2010
DOI:10.1021/ac902325j
Molecular imaging of separate but still incompletely resolved spots on high-performance thin-layer chromatography (HPTLC) plates is used for the direct analysis of porcine brain lipids by desorption electrospray ionization mass spectrometry (DESI-MS). Eight class-specific spots were imaged in the negative ion mode and shown to contain more than fifty lipids. A low lateral resolution of 400 × 400 μm allowed simple, rapid, and incomplete separation to be combined with DESI imaging for the identification of many components of these extremely complex mixtures. In this work, tandem mass spectrometry (MS/MS) was also employed to confirm the identity of particular lipids directly on HPTLC plates.
Co-reporter:Livia S. Eberlin, Allison L. Dill, Anthony B. Costa, Demian R. Ifa, Liang Cheng, Timothy Masterson, Michael Koch, Timothy L. Ratliff and R. Graham Cooks
Analytical Chemistry 2010 Volume 82(Issue 9) pp:3430
Publication Date(Web):April 7, 2010
DOI:10.1021/ac9029482
Development of methods for rapid distinction between cancerous and non-neoplastic tissues is an important goal in disease diagnosis. To this end, desorption electrospray ionization mass spectrometry (DESI-MS) imaging was applied to analyze the lipid profiles of thin tissue sections of 68 samples of human prostate cancer and normal tissue. The disease state of the tissue sections was determined by independent histopathological examination. Cholesterol sulfate was identified as a differentiating compound, found almost exclusively in cancerous tissues including tissue containing precancerous lesions. The presence of cholesterol sulfate in prostate tissues might serve as a tool for prostate cancer diagnosis although confirmation through larger and more diverse cohorts and correlations with clinical outcome data is needed.
Co-reporter:Nathaniel L. Sanders, Sameer Kothari, Guangming Huang, Gary Salazar and R. Graham Cooks
Analytical Chemistry 2010 Volume 82(Issue 12) pp:5313
Publication Date(Web):May 24, 2010
DOI:10.1021/ac1008157
A miniature mass spectrometer was modified by incorporating a conversion dynode detector system and the appropriate electronics to allow the detection of negatively charged ions. The system was fitted with a discontinuous atmospheric pressure interface to allow external ionization by desorption electrospray ionization (DESI). It was used to identify the explosives 2,4,6-trinitrotoluene (TNT), 2,4,6-trinitrophenyl-N-methylnitramine (Tetryl), and octahydro-1,3,5,7-tetranitro-1,3,5,7-tetrazocane (HMX) present in trace amounts on surfaces (500 pg/cm2 to 1 μg/cm2) both individually and as components of mixtures. Detection of explosives was demonstrated in the presence of an interfering matrix. A large surface (5 cm ×15 cm) on which 1 μg/cm2 samples of TNT, Tetryl, and HMX had been spotted randomly was interrogated in 22 s in the full scan mode, and signals characteristic of each of the explosives were observed in the DESI mass spectrum.
Co-reporter:Yu Xia and R. Graham Cooks
Analytical Chemistry 2010 Volume 82(Issue 7) pp:2856
Publication Date(Web):March 2, 2010
DOI:10.1021/ac9028328
Cleavage of the disulfide bond within a polypeptide was observed when the nanoelectrospray (nanoESI) plume of a peptide solution interacted with a low-temperature helium plasma in air. Online mass spectrometric analysis revealed that chain separation accompanied by a mass increase of 1 or 16 Da for each chain was common to peptides having an interchain disulfide bond, while for peptides having intrachain disulfide bonds, the reaction products typically showed mass increases of 17 Da. Experimental results suggested that hydroxyl radicals initiated from the plasma were likely to be responsible via dissociative addition to the disulfide bond (RSSR′), giving rise to RSH and R′SO•. When the hydroxyl radical addition product ions ([M + nH + OH]n•+, n is the charge state) generated from peptides having intrachain peptides were subjected to collision-induced dissociation (CID) in an ion trap, a-, b-, and y-type sequence ions within the cyclic structure defined by the disulfide bond were observed in addition to the exocyclic cleavages typically seen from CID of [M + nH]n+ peptide ions. Rich structural information could thus be obtained. These findings were demonstrated in 14 peptides containing disulfide bonds and further by bovine insulin, which has three disulfide bonds. Collisional activation of the [M + 5H + OH]5•+ insulin ions provided 76% of the possible backbone cleavages as compared to 26% acquired from CID of the [M + 5H]5+ ions.
Co-reporter:Santosh Soparawalla, Gary A. Salazar, Ewa Sokol, Richard H. Perry and R. Graham Cooks  
Analyst 2010 vol. 135(Issue 8) pp:1953-1960
Publication Date(Web):10 Jun 2010
DOI:10.1039/C0AN00189A
Ambient ionization methods such as desorption electrospray ionization (DESI) allow the analysis of chemicals adsorbed at surfaces without the need for sample (or surface) pretreatment. A limitation of current implementations of these ionization sources is the small size of the area that can be sampled. This makes examination of surfaces of large areas time-consuming because of the need to raster across the surface. This paper describes a DESI source that produces a spray plume with an effective desorption/ionization area of 3.6 cm2, some 200 times larger than given by conventional DESI sources. Rhodamine 6G and several drugs of abuse (codeine, heroin and diazepam) were used to demonstrate the ability to use large-area DESI MS to perform rapid (a few seconds) representative sampling of areas of the order of several square centimetres without scanning the probe across the surface. The large area ion source displayed high sensitivity (limits of detection in the high nanogram range) and high reproducibility (∼20 to 35% relative standard deviation). The rapid analysis of even larger surfaces (hundreds of cm2) for traces of explosives is possible using a sorbent surface wipe followed by large-area DESI interrogation performed directly on the wipe material. The performance of this mass transfer dry wipe method was examined by determination of the limits of detection of several explosives. Surfaces with different topographies and compositions were also tested. Using this method, absolute limits of detection observed for HMX and RDX from plastic surfaces and skin were found to be as low as 10 ng cm−2. The concentration of residue from large surface areas in this technique allowed the detection of 100 ng of explosives from surfaces with areas ranging from 1.00 × 103 cm2 to 1.40 × 104 cm2.
Co-reporter:Joshua S. Wiley, Juan F. García-Reyes, Jason D. Harper, Nicholas A. Charipar, Zheng Ouyang and R. Graham Cooks  
Analyst 2010 vol. 135(Issue 5) pp:971-979
Publication Date(Web):12 Jan 2010
DOI:10.1039/B919493B
Low-temperature plasma (LTP) permits direct ambient ionization and mass analysis of samples in their native environment with minimal or no prior preparation. LTP utilizes dielectric barrier discharges (DBDs) to create a low power plasma which is guided by gas flow onto the sample from which analytes are desorbed and ionized. In this study, the potential of LTP-MS for the detection of pesticide residues in food is demonstrated. Thirteen multi-class agricultural chemicals were studied (ametryn, amitraz, atrazine, buprofezin, DEET, diphenylamine, ethoxyquin, imazalil, isofenphos-methyl, isoproturon, malathion, parathion-ethyl and terbuthylazine). To evaluate the potential of the proposed approach, LTP-MS experiments were performed directly on fruit peels as well as on fruit/vegetable extracts. Most of the agrochemicals examined displayed remarkable sensitivity in the positive ion mode, giving limits of detection (LOD) for the direct measurement in the low picogram range. Tandem mass spectrometry (MS/MS) was used to confirm identification of selected pesticides by using for these experiments spiked fruit/vegetable extracts (QuEChERS, a standard sample treatment protocol) at levels as low as 1 pg, absolute, for some of the analytes. Comparisons of the data obtained by direct LTP-MS were made with the slower but more accurate conventional LC-MS/MS procedure. Herbicides spiked in aqueous solutions were detectable at LODs as low as 0.5 µg L−1 without the need for any sample preparation. The results demonstrate that ambient LTP-MS can be applied for the detection and confirmation of traces of agrochemicals in actual market-purchased produce and in natural water samples. Quantitative analysis was also performed in a few selected cases and displayed a relatively high degree of linearity over four orders of magnitude.
Co-reporter:Ayanna U. Jackson, Juan F. Garcia-Reyes, Jason D. Harper, Joshua S. Wiley, Antonio Molina-Díaz, Zheng Ouyang and R. Graham Cooks  
Analyst 2010 vol. 135(Issue 5) pp:927-933
Publication Date(Web):12 Jan 2010
DOI:10.1039/B920155F
Low temperature plasma (LTP) ionization is an ambient plasma ionization method that permits the direct mass analysis of samples in their native atmospheric environment with little or no sample preparation. In this work, the low temperature plasma probe is used in the direct and rapid mass spectrometric analysis of aqueous phase samples including biofluids (saliva, urine, and hair extract). A detailed trace qualitative examination of 14 drugs of abuse has been performed. The relative standard deviation on average was ∼16% for the LTP analysis of the drugs of abuse standards. Eleven of the fourteen drugs of abuse were detected in the low ng mL−1 (3 pg absolute detection) to the mid µg mL−1 (∼30 ng absolute detection) concentration range. One drug, cannabidiol, could not be detected until supplemental heating of the substrate was incorporated into the experimental protocol. The addition of supplemental heating improved the detection limits by at least an order of magnitude to ∼0.5 ng mL−1 to 0.5 µg mL−1 (1.5 pg–1.5 ng absolute) for twelve of the fourteen drugs of abuse, so extending the linear dynamic range which for most analytes was four orders of magnitude. Quantitative capabilities were evaluated using the particular example of benzoylecgonine in urine by employing a deuterated internal standard. Matrix effects observed during the analysis of the drugs in complex biological fluids are also discussed. In addition, low temperature plasma ionization was applied to the examination of real (not spiked) biological samples and these results were confirmed using standard LC/MS methodology. The main advantages observed for this ambient desorption/ionization technique include the capabilities for direct analysis of liquid surfaces for in situ detection and the remarkable sensitivity in the examination of the drugs of abuse investigated here. The disadvantages of the method include the modest quantitative accuracy making LTP most useful as a rapid but semi-quantitative screening method.
Co-reporter:Guangming Huang, Wei Xu, Michelle A. Visbal-Onufrak, Zheng Ouyang and R. Graham Cooks  
Analyst 2010 vol. 135(Issue 4) pp:705-711
Publication Date(Web):24 Dec 2009
DOI:10.1039/B923427F
A low temperature plasma ambient ionization source, coupled to a portable mass spectrometer (Mini 10.5), is used for the determination of melamine contamination in whole milk and related materials. Thermally assisted desorption and ionization of the analyte was achieved with the plasma probe. The small size, low power consumption and capability for direct sampling without pretreatment makes plasma ionization an appropriate ionization method for use with a handheld mass spectrometer. The standard discontinuous atmospheric pressure interface used to connect atmospheric pressure ion sources to mass spectrometers (Gao et al., Anal. Chem., 2008, 80, 4026–4032) was modified by using supplementary pumping to increase the ion transfer efficiency. Whole milk, fish, milk powder and other complex matrices spiked with melamine were placed on glass slides close to the vacuum inlet and analyzed without sample pretreatment. Quantitation in complex matrices was achieved using MS/MS of protonated melamine m/z 127 to yield the characteristic fragment ion of m/z 85. Analysis rates of two samples per minute, levels of melamine as low as 250 ng/mL in whole milk (below the regulatory level in the US of 1 ppm (1 μg/mL) or the European level of 2.5 ppm (μg/mL)), a linear dynamic range of 0.5–50 μg/mL and a relative standard deviation of ca. 7.6–16.2% were achieved. The importance of melamine to public health and the prior lack of a rapid, sensitive and yet highly specific field analysis method add to the relevance of this study.
Co-reporter:Demian R. Ifa, Chunping Wu, Zheng Ouyang and R. Graham Cooks  
Analyst 2010 vol. 135(Issue 4) pp:669-681
Publication Date(Web):02 Mar 2010
DOI:10.1039/B925257F
Mass spectrometry allows rapid chemical analysis of untreated samples in the ambient environment. This is a result of recent rapid progress in ambient ionization techniques. The most widely studied of these new methods, desorption electrospray ionization (DESI), uses fast-moving solvent droplets to extract analytes from surfaces and propel the resulting secondary microdroplets towards the mass analyzer. This review of DESI and other ambient methods centers on the accompanying chemical processes. Manipulation of the chemistry accompanying ambient ionization can be used to optimize chemical analysis, including molecular imaging. Solvent effects, geometry effects, electrochemical processes and mechanisms are covered. Extensions of the methodology to solution-phase analysis, to stand-off detection and to therapeutic drug analysis using miniature mass spectrometers are also treated.
Co-reporter:Chunping Wu, Demian R. Ifa, Nicholas E. Manicke and R. Graham Cooks  
Analyst 2010 vol. 135(Issue 1) pp:28-32
Publication Date(Web):17 Nov 2009
DOI:10.1039/B919816D
Subtle differences in the spatial distributions of closely related compounds including norepinephrine and epinephrine as well multiple lipids are easily distinguished in adult porcine (17 × 8 mm) and rabbit (7 × 4 mm) adrenal glands in a DESI-MS imaging experiment at atmospheric pressure with a spatial resolution of ∼200 µm. Sensitive and specific detection in the course of DESI imaging discloses details of catecholamine distribution in porcine adrenal medulla and cortex; the average mass of epinephrine interrogated in each pixel is estimated to be about 150 pg. The distribution of ascorbic acid was revealed in the negative ion mode. In addition, the distribution of cholesterol, which cannot be observed using conventional DESI, was obtained using in situ reaction with betaine aldehyde added to the DESI spray while imaging the porcine adrenal gland tissue. Four characteristic types of distributions were observed, with major amounts of the components in the medulla, the cortex, the reticular zone or in the fourth case, being homogeneously distributed. The results agree with and extend information available from histological studies.
Co-reporter:Fatkhulla K. Tadjimukhamedov
Journal of The American Society for Mass Spectrometry 2010 Volume 21( Issue 9) pp:1477-1481
Publication Date(Web):2010 September
DOI:10.1016/j.jasms.2010.06.001
A planar differential mobility spectrometer (DMS) was coupled to a Mini 10 handheld rectilinear ion trap (RIT) mass spectrometer (MS) (total weight 10 kg), and the performance of the instrument was evaluated using illicit drug analysis. Coupling of DMS (which requires a continuous flow of drift gas) with a miniature MS (which operates best using sample introduction via a discontinuous atmospheric pressure interface, DAPI), was achieved with auxiliary pumping using a 5 L/min miniature diaphragm sample pump placed between the two devices. On-line ion mobility filtering showed to be advantageous in reducing the background chemical noise in the analysis of the psychotropic drug diazepam in urine using nanoelectrospray ionization. The combination of a miniature mass spectrometer with simple and rapid gas-phase ion separation by DMS allowed the characteristic fragmentation pattern of diazepam to be distinguished in a simple urine extract at lower limits of detection (50 ng/mL) than that achieved without DMS (200 ng/mL). The additional separation power of DMS facilitated the identification of two drugs of similar molecular weight, morphine (average MW = 285.34) and diazepam (average MW = 284.70), using a miniature mass spectrometer capable of unit resolution. The similarity in the proton affinities of these two compounds resulted in some cross-interference in the MS data due to facile ionization of the neutral form of the compound even when the ionic form had been separated by DMS.
Co-reporter:Abraham Badu-Tawiah;Celine Bland
Journal of The American Society for Mass Spectrometry 2010 Volume 21( Issue 4) pp:572-579
Publication Date(Web):2010 April
DOI:10.1016/j.jasms.2009.12.012
The use of non-aqueous solvents in desorption electrospray ionization mass spectrometry (DESI-MS) is explored by analyzing a set of 43 compounds using binary mixtures of chloroform, tetrahydrofuran, and acetonitrile as the spray solvent. Comparisons of data obtained from chloroform/tetrahydrofuran (1:1) and chloroform/acetonitrile (1:1) spray solvents with the standard aqueous-based spray solvent (methanol/water, 1:1) shows that the non-aqueous systems have practical value for DESI, especially in the analysis of hydrophobic compounds. Non-aqueous spray solvents were used to ionize thermometer molecules (benzyl pyridinium salts) and showed lower internal energies (softer DESI ionization compared with methanol/water, 1:1), a result that has parallels in known solvent effects in electrospray ionization and is explained by solvent effects on surface tension. Consideration of octanol/water partition coefficients (Kow) of the 43 analytes in the light of their DESI results reveals the importance of the solubility of analyte in the spray solvent in producing high quality mass spectra. This finding provides additional support for the droplet pick-up description of the DESI mechanism, which is based on analyte dissolution in the spray solvent, followed by splashing of subsequently arriving droplets in the liquid film to form microdroplets of dissolved analyte. DESI solvent optimization can be improved by the use of Kow of the analyte as an indication of the polarity of the most appropriate solvent system.
Co-reporter:Liang Gao;Guangtao Li
Journal of The American Society for Mass Spectrometry 2010 Volume 21( Issue 2) pp:209-214
Publication Date(Web):2010 February
DOI:10.1016/j.jasms.2009.10.005
Axial collision induced dissociation (CID) and high-pressure resonance CID were implemented and compared with normal low-pressure resonance CID in a miniature ion trap mass spectrometer to obtain more complete fragmentation spectra. Axial CID was realized simply by applying a potential to the discontinuous atmospheric pressure interface (DAPI) capillary without performing parent ion isolation before dissociation. High-pressure resonance CID employed a double-introduction pulse scan function, by means of which precursor ions isolated at low-pressure (<10−3 torr) were dissociated at high-pressure (0.1 torr-1 torr) with higher excitation energy, so that tandem MS of isolated precursor ions was achieved and extensive fragmentation was obtained. A simple peptide (Leu-enkephalin) and dye molecule (rhodamine B) ionized by ESI were used to investigate both methods and compare them with normal low-pressure resonance CID.
Co-reporter:Chunping Wu;Kuangnan Qian;Marcela Nefliu
Journal of The American Society for Mass Spectrometry 2010 Volume 21( Issue 2) pp:261-267
Publication Date(Web):2010 February
DOI:10.1016/j.jasms.2009.10.006
Saturated nonfunctionalized hydrocarbons can be oxidized in situ by initiating an electrical discharge during desorption electrospray ionization (DESI) to generate the corresponding alchohols and ketones. This form of reactive DESI experiment can be utilized as an in situ derivatization method for rapid and direct analysis of alkanes at atmospheric pressure without sample preparation. Betaine aldehyde was incorporated into the DESI spray solution to improve the sensitivity of detecting the long-chain alcohol oxidation products. The limit of detection for alkanes (C15H32 to C30H62) from pure samples is ∼20 ng. Multiple oxidations and dehydrogenations occurred during the DESI discharge, but no hydrocarbon fragmentation was observed, even for highly branched squalane. Using exact mass measurements, the technique was successfully implemented for analysis of petroleum distillates containing saturated hydrocarbons.
Co-reporter:Guangming Huang;Liang Gao;Jason Duncan
Journal of The American Society for Mass Spectrometry 2010 Volume 21( Issue 1) pp:132-135
Publication Date(Web):2010 January
DOI:10.1016/j.jasms.2009.09.018
The capabilities of a portable mass spectrometer for real-time monitoring of trace levels of benzene, toluene, and ethylbenzene in air are illustrated. An atmospheric pressure interface was built to implement atmospheric pressure chemical ionization for direct analysis of gas-phase samples on a previously described miniature mass spectrometer (Gao et al. Anal. Chem.2006,78, 5994–6002). Linear dynamic ranges, limits of detection and other analytical figures of merit were evaluated: for benzene, a limit of detection of 0.2 parts-per-billion was achieved for air samples without any sample preconcentration. The corresponding limits of detection for toluene and ethylbenzene were 0.5 parts-per-billion and 0.7 parts-per-billion, respectively. These detection limits are well below the compounds’ permissible exposure levels, even in the presence of added complex mixtures of organics at levels exceeding the parts-per-million level. The linear dynamic ranges of benzene, toluene, and ethylbenzene are limited to approximately two orders of magnitude by saturation of the detection electronics.
Co-reporter:Abraham Badu-Tawiah
Journal of The American Society for Mass Spectrometry 2010 Volume 21( Issue 8) pp:1423-1431
Publication Date(Web):2010 August
DOI:10.1016/j.jasms.2010.04.001
Solvent optimization is an important procedure in desorption electrospray ionization (DESI) and in this study the effects of solvent surface tension are explored. Data are presented for methanol/water/surfactant solvent systems, which show increases in ion signals of more than an order of magnitude when low concentrations of surfactants are added to the standard methanol/water (1:1) spray solvent. Examples of analytes tested include food chemicals, peptides, pharmaceuticals, and drugs of abuse. The improvement in ion intensity is mainly attributed to the effect of surface tension in producing smaller spray droplets, which are shown to cover a larger surface area. Surfactant-containing spray solutions allowed extension of DESI-MS analysis to previously intractable analytes like melamine and highly hydrophobic compounds like the sudan dyes.
Co-reporter:Marion Girod;Yunzhou Shi;Ji-Xin Cheng
Journal of The American Society for Mass Spectrometry 2010 Volume 21( Issue 7) pp:1177-1189
Publication Date(Web):2010 July
DOI:10.1016/j.jasms.2010.03.028
Imaging mass spectrometry allows for the direct investigation of tissue samples to identify specific biological compounds and determine their spatial distributions. Desorption electrospray ionization (DESI) mass spectrometry has been used for the imaging and analysis of rat spinal cord cross sections. Glycerophospholipids and sphingolipids, as well as fatty acids, were detected in both the negative and positive ion modes and identified through tandem mass spectrometry (MS/MS) product ion scans using collision-induced dissociation and accurate mass measurements. Differences in the relative abundances of lipids and free fatty acids were present between white and gray matter areas in both the negative and positive ion modes. DESI-MS images of the corresponding ions allow the determination of their spatial distributions within a cross section of the rat spinal cord, by scanning the DESI probe across the entire sample surface. Glycerophospholipids and sphingolipids were mostly detected in the white matter, while the free fatty acids were present in the gray matter. These results show parallels with reported distributions of lipids in studies of rat brain. This suggests that the spatial intensity distribution reflects relative concentration differences of the lipid and fatty acid compounds in the spinal cord tissue. The “butterfly” shape of the gray matter in the spinal cord cross section was resolved in the corresponding ion images, indicating that a lateral resolution of better than 200 μm was achieved. The selected ion images of lipids are directly correlated with anatomic features on the spinal cord corresponding to the white and the gray matter.
Co-reporter:He Wang;Jiangjiang Liu;R.Graham Cooks ;Zheng Ouyang
Angewandte Chemie International Edition 2010 Volume 49( Issue 5) pp:877-880
Publication Date(Web):
DOI:10.1002/anie.200906314
Co-reporter:LiviaS. Eberlin;DemianR. Ifa Dr.;Chunping Wu ;R.Graham Cooks
Angewandte Chemie International Edition 2010 Volume 49( Issue 5) pp:873-876
Publication Date(Web):
DOI:10.1002/anie.200906283
Co-reporter:He Wang;Jiangjiang Liu;R.Graham Cooks ;Zheng Ouyang
Angewandte Chemie International Edition 2010 Volume 49( Issue 5) pp:
Publication Date(Web):
DOI:10.1002/anie.200907225
Co-reporter:LiviaS. Eberlin;AllisonL. Dill;AlexraJ. Golby Dr.;KeithL. Ligon Dr.;JustinM. Wiseman Dr.;R.Graham Cooks ;NathalieY.R. Agar Dr.
Angewandte Chemie International Edition 2010 Volume 49( Issue 34) pp:5953-5956
Publication Date(Web):
DOI:10.1002/anie.201001452
Co-reporter:He Wang;Jiangjiang Liu;R.Graham Cooks ;Zheng Ouyang
Angewandte Chemie 2010 Volume 122( Issue 5) pp:889-892
Publication Date(Web):
DOI:10.1002/ange.200906314
Co-reporter:LiviaS. Eberlin;DemianR. Ifa Dr.;Chunping Wu ;R.Graham Cooks
Angewandte Chemie 2010 Volume 122( Issue 5) pp:885-888
Publication Date(Web):
DOI:10.1002/ange.200906283
Co-reporter:He Wang;Jiangjiang Liu;R.Graham Cooks ;Zheng Ouyang
Angewandte Chemie 2010 Volume 122( Issue 5) pp:
Publication Date(Web):
DOI:10.1002/ange.200907225
Co-reporter:LiviaS. Eberlin;AllisonL. Dill;AlexraJ. Golby Dr.;KeithL. Ligon Dr.;JustinM. Wiseman Dr.;R.Graham Cooks ;NathalieY.R. Agar Dr.
Angewandte Chemie 2010 Volume 122( Issue 34) pp:6089-6092
Publication Date(Web):
DOI:10.1002/ange.201001452
Co-reporter:Liang Gao, Guangtao Li, Jobin Cyriac, Zongxiu Nie and R. Graham Cooks
The Journal of Physical Chemistry C 2010 Volume 114(Issue 12) pp:5331-5337
Publication Date(Web):October 19, 2009
DOI:10.1021/jp904960t
Distributions of charge deposited on surfaces in desorption electrospray ionization mass spectrometry (DESI-MS) were investigated using a static charge measurement apparatus, which gives an output voltage proportional to the local surface charge density. By scanning the probe along the surface and taking measurements at fixed intervals, a contour image of relative charge density reflecting the charge distribution on the surface can be plotted. Through the measured charge distribution and the derived charge density gradient, the motion of charged droplets in the DESI experiment can be inferred. Measurements taken under various DESI operating conditions, including spray pressure, angle, flow rate, and sprayer tip-to-surface distance, show that charge is spread over an area of a few square centimeters under typical conditions; effective desorption occurs from a much smaller area (∼1 mm2) of highest charge density. Higher sheath gas pressures and smaller sprayer tip-to-surface distances lead to concentration of charge distribution into a smaller area, whereas smaller spray angles favor charge distribution over a larger area. The appearance of the highest charge density in front of the DESI sprayer tip and near the MS inlet suggests that charged droplets are moved toward the MS inlet by pneumatic forces and by the vacuum suction, in agreement with results of earlier simulations. The present observations are consistent with previous studies using other techniques and support the accepted droplet splashing DESI mechanism.
Co-reporter:Guangming Huang, Zheng Ouyang and R. Graham Cooks  
Chemical Communications 2009 (Issue 5) pp:556-558
Publication Date(Web):01 Dec 2008
DOI:10.1039/B818059H
Ambient ionization using a low-temperature plasma (LTP) probe combined with tandem mass spectrometry (MS/MS) allows detection and quantitation of melamine in milk powder, whole milk and other products at levels down to low ppb in analysis times of a few tens of seconds.
Co-reporter:Allison L. Dill, Demian R. Ifa, Nicholas E. Manicke, Anthony B. Costa, José A. Ramos-Vara, Deborah W. Knapp and R. Graham Cooks
Analytical Chemistry 2009 Volume 81(Issue 21) pp:8758
Publication Date(Web):October 7, 2009
DOI:10.1021/ac901028b
Desorption electrospray ionization mass spectrometry (DESI-MS) was used in an imaging mode to interrogate the lipid profiles of thin tissue sections of canine spontaneous invasive transitional cell carcinoma of the urinary bladder (a model of human invasive bladder cancer) as well as adjacent normal tissue from four different dogs. The glycerophospholipids and sphingolipids that appear as intense signals in both the negative ion and positive ion modes were identified by tandem mass spectrometry product ion scans using collision-induced dissociation. Differences in the relative distributions of the lipid species were present between the tumor and adjacent normal tissue in both the negative and positive ion modes. DESI-MS images showing the spatial distributions of particular glycerophospholipids, sphinoglipids, and free fatty acids in both the negative and positive ion modes were compared to serial tissue sections that were stained with hematoxylin and eosin (H&E). Increased absolute and relative intensities for at least five different glycerophospholipids and three free fatty acids in the negative ion mode and at least four different lipid species in the positive ion mode were seen in the tumor region of the samples in all four dogs. In addition, one sphingolipid species exhibited increased signal intensity in the positive ion mode in normal tissue relative to the diseased tissue. Principal component analysis was also used to generate unsupervised statistical images from the negative ion mode data, and these images are in excellent agreement with the DESI images obtained from the selected ions and also the H&E-stained tissue.
Co-reporter:Nicholas E. Manicke, Marcela Nefliu, Chunping Wu, John W. Woods, Vladimir Reiser, Ronald C. Hendrickson and R. Graham Cooks
Analytical Chemistry 2009 Volume 81(Issue 21) pp:8702
Publication Date(Web):October 5, 2009
DOI:10.1021/ac901739s
One of the hallmarks of atherosclerosis is the accumulation of lipoproteins within the wall of blood vessels. The lipid composition can vary among atheroma, even within a single individual, and is also dynamic, changing as the lesion progresses. One desirable characteristic of atheroma is their stability, as the rupture of unstable plaques can interfere with normal blood flow to the brain or heart, leading to stroke or heart attack. Desorption electrospray ionization mass spectrometry (DESI-MS) was used in this study for the profiling and imaging of arterial plaques. DESI-MS is an ambient ionization method in which a charged, nebulized solvent spray is directed a surface. In the positive and negative ion modes, sodium and chloride adducts, respectively, of diacyl glycerophosphocholines (GPChos), sphingomyelins (SMs), and hydrolyzed GPChos were detected. Also, cholesteryl esters were detected via adduct formation with ammonium cations. Finally, cholesterol was imaged in the atheroma by doping the charge labeling reagent betaine aldehyde directly into the DESI solvent spray, leading to in situ chemical derivatization of the otherwise nonionic cholesterol. DESI imaging experiments, in which the spatial distribution of the various chemical species is determined by scanning the DESI probe across an entire sample surface, revealed that there are lipid rich regions within the arterial walls, and the lipid rich regions seem to have one of two different lipid profiles. These lipid rich regions likely correspond to the areas of the tissue where lipoprotein particles have accumulated. It is also possible that the different lipid distributions may correlate with the stability or vulnerability of that particular region of the plaque.
Co-reporter:Juan F. García-Reyes, Ayanna U. Jackson, Antonio Molina-Díaz and R. Graham Cooks
Analytical Chemistry 2009 Volume 81(Issue 2) pp:820
Publication Date(Web):December 17, 2008
DOI:10.1021/ac802166v
Desorption electrospray ionization (DESI) is applied to the rapid, in situ, direct qualitative and quantitative (ultra)trace analysis of agrochemicals in foodstuffs. To evaluate the potential of DESI mass spectrometry (MS) in toxic residue testing in food, 16 representative multiclass agricultural chemicals (pesticides, insecticides, herbicides, and fungicides) were selected (namely, ametryn, amitraz, azoxystrobin, bitertanol, buprofezin, imazalil, imazalil metabolite, isofenphos-methyl, malathion, nitenpyram, prochloraz, spinosad, terbuthylazine, thiabendazole, and thiacloprid). The DESI-MS experiments were performed using 3 μL of solution spotted onto conventional smooth poly(tetrafluoroethylene) (PTFE) surfaces, with examination by MS and tandem mass spectrometry (MS/MS) using an ion trap mass spectrometer. Optimization of the spray solvent led to the use of acetonitrile/water (80:20) (v/v), with 1% formic acid. Most of the compounds tested showed remarkable sensitivity in the positive ion mode, approaching that attainable with conventional direct infusion electrospray mass spectrometry. To evaluate the potential of the proposed approach in real samples, different experiments were performed including the direct DESI-MS/MS analysis of fruit peels and also of fruit/vegetable extracts. The results proved that DESI allows the detection and confirmation of traces of agrochemicals in actual market-purchased samples. In addition, MS/MS confirmation of selected pesticides in spiked vegetable extracts was obtained at absolute levels as low as 1 pg for ametryn. Quantitation of imazalil residues was also undertaken using an isotopically labeled standard. The data obtained were in agreement with those from the liquid chromatography mass spectrometry (LC−MS) reference method, with relative standard deviation (RSD) values consistently below 15%. The results obtained demonstrate the sensitivity of DESI as they meet the stringent European Union pesticide regulation requirements (maximum residue levels) for a large percentage of the studied compounds.
Co-reporter:Sameer Kothari, Qingyu Song, Yu Xia, Miriam Fico, Dennis Taylor, Jonathan W. Amy, George Stafford and R. Graham Cooks
Analytical Chemistry 2009 Volume 81(Issue 4) pp:1570
Publication Date(Web):January 27, 2009
DOI:10.1021/ac8023284
A four-channel multiplexed mass spectrometer with rectilinear ion trap (RIT) mass analyzers was designed, constructed, and characterized. The system consists of four parallel atmospheric pressure ion (API) sources, four RIT mass analyzers, four sets of ion optical elements, and four conversion dynode detectors. The complete instrument is housed in a single vacuum manifold with a common vacuum system. It has a relatively small footprint, and costs and complexity were minimized and controls simplified by sharing the electronics and control modules among different channels. Each channel of the instrument can be operated in either positive or negative ion mode with a choice of ionization methods to improve the information content from an experiment. Also, the instrument is equipped with simultaneous data acquisition capabilities from all four channels, but the use of a common RF electronics system limits the degree to which the analyzer channels can be scanned independently. The instrument was characterized over the mass/charge range of 150 to 1300 Th. Mass misassignments in different ion traps because of machining and assembly tolerances were avoided by the application of supplementary direct current signals to each mass analyzer to correct mass offsets. A multiplexed automatic gain control (AGC) scheme was developed to control the ion population in each of the traps independently. These two features allow tandem mass spectrometry to be performed with an isolation window of 1 Th so trapping identical ions in all four channels. There are two principal modes of operation. In one, the same sample is analyzed in all four channels using different ionization methods to increase the information content of the analysis. In the other mode of operation, different samples are analyzed in all four channels with the same ionization method, so providing higher throughput. These capabilities were demonstrated by examining lipids produced by Escherichia coli and complex mixtures containing drugs of abuse.
Co-reporter:Qingyu Song, Scott A. Smith, Liang Gao, Wei Xu, Michael Volný, Zheng Ouyang and R. Graham Cooks
Analytical Chemistry 2009 Volume 81(Issue 5) pp:1833
Publication Date(Web):January 29, 2009
DOI:10.1021/ac802213p
A waveform isolation method is described for the mass-selective transmission of ions through quadrupole mass filters, and it is implemented on a new tandem mass analyzer instrument. The method features the application of broad-band waveforms comprising appropriate frequencies to cause mass-selective instability in ions of particular mass-to-charge (m/z) and to transmit all others. The experiment is implemented in a tandem quadrupole system in which the first mass filter is a rectilinear ion trap (RIT) operated in a continuous mass-selective mode to transmit ions of ions of one or more arbitrarily selected m/z value(s). The second analyzer was used to verify the quality of the mass selection achieved using the first analyzer via conventional quadrupole ion trap mass-selective instability scanning. A new subtype of product ion tandem mass spectrometry (MS/MS) scan, termed the summed product ion scan, is demonstrated with a mixture of biological compounds. It is used to characterize product ions arising after simultaneous isolation and collisional activation of multiple precursor species, in this case ions of the same analyte generated in different charge states. The summed product ion scan can be useful for enhancing sensitivity for the analyte of interest or for providing more comprehensive information about an analyte than is available by monitoring a single ionized form of the analyte. The analytical performance of the waveform isolation method is tested using simple drug mixtures, and its potential for increasing overall yields in preparative mass spectrometry is explored briefly. It is shown that efficiencies of ca. 70% of ion transfer to a surface for ion soft landing surface can be achieved. The upper mass range is limited by axial acceleration arising from the stretched geometry, and one solution to this problem is provided.
Co-reporter:Chunping Wu, Demian R. Ifa, Nicholas E. Manicke and R. Graham Cooks
Analytical Chemistry 2009 Volume 81(Issue 18) pp:7618
Publication Date(Web):August 19, 2009
DOI:10.1021/ac901003u
Direct and rapid analysis of cholesterol was accomplished in the ambient environment using reactive desorption electrospray ionization (DESI) mass spectrometry. This was achieved by electrospraying reagent solutions in the form of high velocity charged droplets at surfaces such as dried serum samples and animal tissue sections. Betaine aldehyde, incorporated into the spray solvent, reacts selectively and rapidly with the alcohol group of cholesterol by nucleophilic addition, forming a hemiacetal salt. Limits of detection for pure cholesterol and related compounds were ∼1 ng when a solution of cholesterol of 1 μg/mL was spotted onto the surface. Quantitative analysis of free cholesterol in serum using reactive DESI was demonstrated using cholesterol-d7 as internal standard. High throughput analysis of small volumes of serum spotted onto a suitable substrate was achieved at an analysis rate of ∼14 s per sample, with a relative standard deviation (RSD) of ca. 6%. Use of reactive DESI in the imaging mode allowed 2D spatial distributions of phospholipids and cholesterol to be recorded simultaneously in rat brain tissues.
Co-reporter:Miriam Fico, Jeffrey D. Maas, Scott A. Smith, Anthony B. Costa, Zheng Ouyang, William J. Chappell and R. Graham Cooks  
Analyst 2009 vol. 134(Issue 7) pp:1338-1347
Publication Date(Web):03 Apr 2009
DOI:10.1039/B822140E
The design and operation of an annular array of parallel, miniature rectilinear ion traps (RITs) is discussed. Stereolithography apparatus (SLA), a previously validated method for ion trap fabrication, was applied here to construct an array of mass analyzers and their mounting hardware. Two versions of the array were tested, using either six or twelve stretched RITs (x0 = 1.66 mm, y0 = 1.33 mm, z = 16.66 mm) mounted in parallel about the circumference of a circle with the interior and exterior x-electrode planes oriented tangential to the inner and outer annulus rings, respectively. The arrangement of the ion traps is such that the ions are radially ejected just above the throat of a centrally located electron multiplier detector into which they are accelerated. The mass analyzer array was mounted in a custom vacuum manifold. The resolution, mass-to-charge ratio (m/z) range, and MS/MS capabilities were tested using electrospray ionization (ESI). The devices were tested in two configurations: (i) separate ion sources for each trap, and (ii) a single ion source for the entire array.
Co-reporter:Ayanna U. Jackson, Alessandra Tata, Chunping Wu, Richard H. Perry, George Haas, Leslie West and R. Graham Cooks  
Analyst 2009 vol. 134(Issue 5) pp:867-874
Publication Date(Web):05 Mar 2009
DOI:10.1039/B823511B
The analysis of Stevia leaves has been demonstrated without any sample preparation using desorption electrospray ionization (DESI) mass spectrometry. Direct rapid analysis was achieved using minimal amounts of sample (∼0.15 cm × 0.15 cm leaf fragment). Characteristic constituents of the Stevia plant are observed in both the positive and negative ion modes including a series of diterpene ‘sweet’ glycosides. The presence of the glycosides was confirmed via tandem mass spectrometry analysis using collision-induced dissociation and further supported by exact mass measurements using an LTQ-Orbitrap. The analysis of both untreated and hexane-extracted dry leaves proved that DESI can be successfully used to analyze untreated leaf fragments as identical profiles were obtained from both types of samples. Characterization and semi-quantitative determination of the glycosides was achieved based on the glycoside profile within the full mass spectrum. In addition, the presence of characteristic glycosides in an all-natural commercial Stevia dietary supplement was confirmed. This study provides an example of the application of DESI to direct screening of plant materials, in this case diterpene glycosides.
Co-reporter:Yishu Song, Nari Talaty, Kirill Datsenko, Barry L. Wanner and R. Graham Cooks  
Analyst 2009 vol. 134(Issue 5) pp:838-841
Publication Date(Web):16 Mar 2009
DOI:10.1039/B900069K
Desorption electrospray ionization mass spectrometry (DESI-MS) of culture of the bacterium Bacillus subtilis as a biofilm growing on agar nutrient gives simple, high quality mass spectra dominated in both the positive and negative ion modes by signals due to the cyclic lipopeptide, Surfactin(C15). This in vivo experiment, performed by direct analysis of untreated microorganism samples under ambient conditions, allows rapid identification of this microorganism and the antibiotics that it produces. The result is suggestive of the capabilities of DESI-MS for in vivo microorganism characterization in general and for monitoring fermentation processes for the production of antibiotics and other biochemicals.
Co-reporter:Liang Gao, Guangtao Li, Zongxiu Nie, Jason Duncan, Zheng Ouyang, R. Graham Cooks
International Journal of Mass Spectrometry 2009 Volume 283(1–3) pp:30-34
Publication Date(Web):1 June 2009
DOI:10.1016/j.ijms.2009.01.004
Discontinuous atmospheric pressure interfaces (DAPI) are used to match the rate of sample introduction to the pumping capacity of miniature mass spectrometers. In this study, the influence of the interface flow conductance and the mass spectrometer pumping speed on ion introduction into a handheld mass spectrometer is investigated. Results show that an intermediate flow conductance (2.6 × 10−3 L/s) gives the best ion introduction efficiency whereas the pumping speed has no influence in the range studied (0.35–7.1 L/s) except that a minimum pumping speed of 0.35 L/s is required. The linear dynamic range decreases with increasing interface open time, a result that corresponds to observations made using standard electrical gating of ion introduction a method that is not available at the high pressures involved in API into miniature systems where ions are transported through pneumatic flow. However, the mechanical opening of the interface with DAPI can be used for automatic gain control (AGC) using an external ion source. Software modifications to allow the use of multiple ion introduction pulses before mass analysis of the trapped ion population improve the detection limits. This method was validated by comparing the results obtained from the same sample using a single ion introduction pulse and multiple ion introduction pulses. In conjunction with this method, a broad-band waveform can be applied to selectively accumulate analyte ions, allowing essentially the entire ion trapping capacity to be devoted to one or more ions of interest.
Co-reporter:Allison L. Dill, Demian R. Ifa, Nicholas E. Manicke, Zheng Ouyang, R. Graham Cooks
Journal of Chromatography B 2009 Volume 877(Issue 26) pp:2883-2889
Publication Date(Web):15 September 2009
DOI:10.1016/j.jchromb.2008.12.058
Desorption electrospray ionization (DESI), a relatively new ambient ionization technique used in mass spectrometry (MS), allows for the direct analysis of samples such as thin tissue sections, to be conducted outside of vacuum in the ambient environment and often without sample preparation. DESI-MS has been used in order to systematically characterize phospholipids, which are abundant species in biological tissue samples. Lipids play important biological roles and differences in lipid compositions have been seen in diseases such as cancer and Alzheimer's disease. Imaging of thin tissue sections exploits the ability of DESI-MS to study these lipids directly in the biological matrix. In imaging MS (IMS), a mass spectrum is recorded at each pixel while moving the surface containing the sample so that the entire sample area is covered. The information in these mass spectra can be combined to create a 2D chemical image of the sample, combining information on spatial distribution with information on chemical identity from the characteristic ions in the mass spectra. DESI-MS has been used to image a variety of tissue samples including human liver adenocarcinoma, rat brain, human breast tissue and canine abdominal tumor tissue. Comparisons between diseased and normal tissue are made in these studies.
Co-reporter:Na Na;Yu Xia;Zhenli Zhu;Xinrong Zhang ;R.Graham Cooks
Angewandte Chemie International Edition 2009 Volume 48( Issue 11) pp:2017-2019
Publication Date(Web):
DOI:10.1002/anie.200805256
Co-reporter:Mario Benassi, Chunping Wu, Marcela Nefliu, Demian R. Ifa, Michael Volný, R. Graham Cooks
International Journal of Mass Spectrometry 2009 280(1–3) pp: 235-240
Publication Date(Web):
DOI:10.1016/j.ijms.2008.10.012
Co-reporter:Zongxiu Nie;Guangtao Li;Michael P. Goodwin
Journal of The American Society for Mass Spectrometry 2009 Volume 20( Issue 6) pp:949-956
Publication Date(Web):2009 June
DOI:10.1016/j.jasms.2009.02.019
Mass-selected polyatomic cations and anions, produced by electrosonic spray ionization (ESSI), were deposited onto polycrystalline Au or fluorinated self-assembled monolayer (FSAM) surfaces by soft landing (SL), using a rectilinear ion trap (RIT) mass spectrometer. Protonated and deprotonated molecules, as well as intact cations and anions generated from such molecules as peptides, inorganic catalysts, and fluorescent dyes, were soft-landed onto the surfaces. Analysis of the modified surfaces was performed in situ by Cs+ secondary ion mass spectrometry (SIMS) using the same RIT mass analyzer to characterize the sputtered ions as that used to mass select the primary ions for SL. Soft-landing times as short as 30 s provided surfaces that yielded good quality SIMS spectra. Chemical reactions of the surfaces modified by SL were generated in an attached reaction chamber into which the surface was transferred under vacuum. For example, a surface on which protonated triethanolamine had been soft landed was silylated using vapor-phase chlorotrimethylsilane before being returned still under vacuum to the preparation chamber where SIMS analysis revealed the silyloxy functionalization. SL and vapor-phase reactions are complementary methods of surface modification and in situ surface analysis by SIMS is a simple way to characterize the products produced by either technique.
Co-reporter:Demian R. Ifa;Ayanna U. Jackson;Giuseppe Paglia
Analytical and Bioanalytical Chemistry 2009 Volume 394( Issue 8) pp:1995-2008
Publication Date(Web):2009 August
DOI:10.1007/s00216-009-2659-2
This review highlights and critically assesses forensic applications in the developing field of ambient ionization mass spectrometry. Ambient ionization methods permit the ionization of samples outside the mass spectrometer in the ordinary atmosphere, with minimal sample preparation. Several ambient ionization methods have been created since 2004 and they utilize different mechanisms to create ions for mass-spectrometric analysis. Forensic applications of these techniques—to the analysis of toxic industrial compounds, chemical warfare agents, illicit drugs and formulations, explosives, foodstuff, inks, fingerprints, and skin—are reviewed. The minimal sample pretreatment needed is illustrated with examples of analysis from complex matrices (e.g., food) on various substrates (e.g., paper). The low limits of detection achieved by most of the ambient ionization methods for compounds of forensic interest readily offer qualitative confirmation of chemical identity; in some cases quantitative data are also available. The forensic applications of ambient ionization methods are a growing research field and there are still many types of applications which remain to be explored, particularly those involving on-site analysis. Aspects of ambient ionization currently undergoing rapid development include molecular imaging and increased detection specificity through simultaneous chemical reaction and ionization by addition of appropriate chemical reagents.
Co-reporter:Nicholas E. Manicke;Thomas Kistler
Journal of The American Society for Mass Spectrometry 2009 Volume 20( Issue 2) pp:321-325
Publication Date(Web):2009 February
DOI:10.1016/j.jasms.2008.10.011
A newly developed high-throughput desorption electrospray ionization (DESI) source was characterized in terms of its performance in quantitative analysis. A 96-sample array, containing pharmaceuticals in various matrices, was analyzed in a single run with a total analysis time of 3 min. These solution-phase samples were examined from a hydrophobic PTFE ink printed on glass. The quantitative accuracy, precision, and limit of detection (LOD) were characterized. Chemical background-free samples of propranolol (PRN) with PRN-d7 as internal standard (IS) and carbamazepine (CBZ) with CBZ-d10 as IS were examined. So were two other sample sets consisting of PRN/PRN-d7 at varying concentration in a biological milieu of 10% urine or porcine brain total lipid extract, total lipid concentration 250 ng/µL. The background-free samples, examined in a total analysis time of 1. 5 s/sample, showed good quantitative accuracy and precision, with a relative error (RE) and relative standard deviation (RSD) generally less than 3% and 5%, respectively. The samples in urine and the lipid extract required a longer analysis time (2. 5 s/sample) and showed RSD values of around 10% for the samples in urine and 4% for the lipid extract samples and RE values of less than 3% for both sets. The LOD for PRN and CBZ when analyzed without chemical background was 10 and 30 fmol, respectively. The LOD of PRN increased to 400 fmol analyzed in 10% urine, and 200 fmol when analyzed in the brain lipid extract.
Co-reporter:Tiina J. Kauppila, Nari Talaty, Ayanna U. Jackson, Tapio Kotiaho, Risto Kostiainen and R. Graham Cooks  
Chemical Communications 2008 (Issue 23) pp:2674-2676
Publication Date(Web):08 May 2008
DOI:10.1039/B804413A
Desorption electrospray ionization mass spectrometry (DESI-MS) is applied to the analysis of carbohydrates and steroids; the detection limits are significantly improved by the addition of low concentrations of salts to the spray solvent.
Co-reporter:Liang Gao, R. Graham Cooks and Zheng Ouyang
Analytical Chemistry 2008 Volume 80(Issue 11) pp:4026
Publication Date(Web):May 8, 2008
DOI:10.1021/ac800014v
The performance of mass spectrometers with limited pumping capacity is shown to be improved through use of a discontinuous atmospheric pressure interface (DAPI). A proof-of-concept DAPI interface was designed and characterized using a miniature rectilinear ion trap mass spectrometer. The interface consists of a simple capillary directly connecting the atmospheric pressure ion source to the vacuum mass analyzer region; it has no ion optical elements and no differential pumping stages. Gases carrying ionized analytes were pulsed into the mass analyzer for short periods at high flow rates rather than being continuously introduced at lower flow rates; this procedure maximized ion transfer. The use of DAPI provides a simple solution to the problem of coupling an atmospheric pressure ionization source to a miniature instrument with limited pumping capacity. Data were recorded using various atmospheric pressure ionization sources, including electrospray ionization (ESI), nano-ESI, atmospheric pressure chemical ionization (APCI), and desorption electrospray ionization (DESI) sources. The interface was opened briefly for ion introduction during each scan. With the use of the 18 W pumping system of the Mini 10, limits of detection in the low part-per-billion levels were achieved and unit resolution mass spectra were recorded.
Co-reporter:Wen-Ping Peng, Michael P. Goodwin, Zongxiu Nie, Michael Volný, Zheng Ouyang and R. Graham Cooks
Analytical Chemistry 2008 Volume 80(Issue 17) pp:6640
Publication Date(Web):August 7, 2008
DOI:10.1021/ac800929w
A new ion soft landing instrument has been built for the controlled deposition of mass selected polyatomic ions. The instrument has been operated with an electrospray ionization source; its major components are an electrodynamic ion funnel to reduce ion loss, a 90-degree bent square quadrupole that prevents deposition of fast neutral molecules onto the landing surface, and a novel rectilinear ion trap (RIT) mass analyzer. The ion trap is elongated (inner dimensions: 8 mm × 10 mm × 10 cm). Three methods of mass analysis have been implemented. (i) A conventional mass-selective instability scan with radial resonance ejection can provide a complete mass spectrum. (ii) The RIT can also be operated as a continuous rf/dc mass filter for isolation and subsequent soft landing of ions of the desired m/z value. (iii) The 90-degree bent square quadrupole can also be used as a continuous rf/dc mass filter. The mass resolution (50% definition) of the RIT in the trapping mode (radial ion ejection) is ∼550. Ions from various test mixtures have been mass selected and collected on fluorinated self-assembled monolayers on gold substrates, as verified by analysis of the surface rinses. Desorption electrospray ionization (DESI) has been used to confirm intact deposition of [Val5]-Angiotensin I on a surface. Nonmass selective currents up to 1.1 nA and mass-selected currents of up to 500 pA have been collected at the landing surface using continuous rf/dc filtering with the RIT. A quantitative analysis of rinsed surfaces showed that the overall solution-to-solution soft landing yields are between 0.2 and 0.4%. Similar experiments were performed with rf/dc isolation of both arginine and lysine from a mixture using the bent square quadrupole in the rf/dc mode. The unconventional continuous mass selection methods maximize soft landing yields, while still allowing the simple acquisition of full mass spectra.
Co-reporter:Liang Gao, Andy Sugiarto, Jason D. Harper, R. Graham Cooks and Zheng Ouyang
Analytical Chemistry 2008 Volume 80(Issue 19) pp:7198
Publication Date(Web):August 29, 2008
DOI:10.1021/ac801275x
A wireless-controlled miniature rectilinear ion trap mass spectrometer system, total weight with batteries 5.0 kg, consuming less than 35 W of power, and having dimensions of 22 cm in length by 12 cm in width by 18 cm in height, is characterized. The design and construction of the mass spectrometer including mass analyzer, vacuum system, electronics system, and data acquisition and processing systems, is detailed. The mass spectrometer is compatible with various types of ionization sources including a glow discharge electron impact ionization source used in the internal ionization mode, and various atmospheric pressure ionization sources, including electrospray ionization, atmospheric pressure chemical ionization, and desorption electrospray ionization, which are employed for external, atmospheric pressure ionization. These external sources are coupled to the miniature mass spectrometer via a capillary interface that is operated in a discontinuous fashion (discontinuous atmospheric pressure interface) to maximize ion transport. The performance of the mass spectrometer for large and small molecules is characterized. Limits of detection in the parts-per-billion range were obtained for selected compounds examined using both the internal ionization and external ionization modes. Tandem mass spectrometry and fast in situ analysis capabilities are also demonstrated using a variety of compounds and ionization sources. Protein molecules are analyzed as the multiply protonated molecules with mass/charge ratios up to 1500 Da/charge.
Co-reporter:Jason D. Harper, Nicholas A. Charipar, Christopher C. Mulligan, Xinrong Zhang, R. Graham Cooks and Zheng Ouyang
Analytical Chemistry 2008 Volume 80(Issue 23) pp:9097
Publication Date(Web):November 4, 2008
DOI:10.1021/ac801641a
A low-temperature plasma (LTP) probe has been developed for ambient desorption ionization. An ac electric field is used to induce a dielectric barrier discharge through use of a specially designed electrode configuration. The low-temperature plasma is extracted from the probe where it interacts directly with the sample being analyzed, desorbing and ionizing surface molecules in the ambient environment. This allows experiments to be performed without damage to the sample or underlying substrate and, in the case of biological analysis on skin surfaces, without electrical shock or perceptible heating. Positive or negative ions are produced from a wide range of chemical compounds in the pure state and as mixtures in the gaseous, solution, or condensed phases, using He, Ar, N2, or ambient air as the discharge gas. Limited fragmentation occurs, although it is greater in the cases of the molecular than the atomic discharge gases. The effectiveness of the LTP probe has been demonstrated by recording characteristic mass spectra and tandem mass spectra of samples containing hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) and 2,4,6-trinitrotoluene (TNT) from poly(tetrafluoroethylene) (PTFE) surfaces where limits of detection are as low as 5 pg. Other performance characteristics, when using a commercial ion trap mass spectrometer, include 3−4 orders of magnitude linear dynamic range in favorable cases. Demonstration applications include direct analysis of cocaine from human skin, determination of active ingredients directly in drug tablets, and analysis of toxic and therapeutic compounds in complex biological samples. Ionization of chemicals directly from bulk aqueous solution has been demonstrated, where limits of detection are as low as 1 ppb. Large surface area sampling and control of fragmentation by a simple adjustment of the electrode configuration during operation are other demonstrated characteristics of the method.
Co-reporter:Michael Volný, Andre Venter, Scott A. Smith, Marco Pazzi and R. Graham Cooks  
Analyst 2008 vol. 133(Issue 4) pp:525-531
Publication Date(Web):14 Feb 2008
DOI:10.1039/B717693G
Time resolved measurements show that during a desorption electrospray ionization (DESI) experiment, the current initially rises sharply, followed by an exponential decrease to a relatively steady current. When the high voltage on the spray emitter is switched off, the current drops to negative values, suggesting that the direction of current flow in the equivalent DESI circuit is reversed. These data demonstrate that the DESI source behaves as a dc capacitor and that the addition of a surface between the sprayer and the counter electrode in DESI introduces a new electrically active element into the system. The charging and discharging behavior was observed using different surfaces and it could be seen both by making current measurements on a plate at the entrance to the mass spectrometer as well as by measuring ion current in the linear ion trap within the vacuum system of the mass spectrometer. The magnitude of the steady state current obtained without analyte present on the surface is different for different surface materials, and different capacitor time constants of the equivalent RC circuits were calculated for different DESI surfaces. The PTFE surface has by far the greatest time constant and is also able to produce the highest DESI currents. Surface properties play a crucial role in charge transfer during DESI in addition to the effects of the chemical properties of the analyte. It is suggested that surface energy (wettability) is an important factor controlling droplet behavior on the surface. The experimental data are correlated with critical surface tension values of different materials. It is proposed, based on the results presented, that super-hydrophobic materials with extremely high contact angles have the potential to be excellent DESI substrates. It is also demonstrated, using the example of the neurotransmitter dopamine, that the surface charge that develops during a DESI-MS experiment can cause electrochemical oxidation of the analyte.
Co-reporter:Nari Talaty, Christopher C. Mulligan, Dina R. Justes, Ayanna U. Jackson, Robert J. Noll and R. Graham Cooks  
Analyst 2008 vol. 133(Issue 11) pp:1532-1540
Publication Date(Web):08 Aug 2008
DOI:10.1039/B807934J
Desorption electrospray ionization (DESI) is applied to the rapid, in-situ, direct qualitative and quantitative analysis of mixtures of explosives and drugs from a variety of fabrics, including cotton, silk, denim, polyester, rayon, spandex, leather and their blends. The compounds analyzed were explosives: trinitrohexahydro-1,3,5-triazine (RDX), octahydro-1,3,5,7-tetranitro-1,3,5,7-tetrazocine (HMX), 2,4,6-trinitrotoluene (TNT), pentaerythritol tetranitrate (PETN) and the drugs of abuse: heroin, cocaine, and methamphetamine. Limits of detection are in the picogram range. DESI analyses were performed without sample preparation and carried out in the presence of common interfering chemical matrices, such as insect repellant, urine, and topical lotions. Spatial and depth profiling was investigated to examine the depth of penetration and lateral resolution. DESI was also used to examine cotton transfer swabs used for travel security sample collection in the screening process. High throughput quantitative analysis of fabric surfaces for targeted analytes is also reported.
Co-reporter:Ayanna U. Jackson, Sean R. Werner, Nari Talaty, Yishu Song, Karinna Campbell, R. Graham Cooks, John A. Morgan
Analytical Biochemistry 2008 Volume 375(Issue 2) pp:272-281
Publication Date(Web):15 April 2008
DOI:10.1016/j.ab.2008.01.011
Desorption electrospray ionization (DESI) was utilized to monitor the presence of targeted central carbon metabolites within bacterial cell extracts and the quench supernatant of Escherichia coli. The targeted metabolites were identified through tandem mass spectrometry (MS/MS) product ion scans using collision-induced dissociation in the negative ion mode. Picogram detection limits were achieved for a majority of the metabolites during MS/MS analysis of standard metabolite solutions. In a [U-13C]glucose pulse experiment, where uniformly labeled glucose was fed to E. coli, the corresponding fragment ions from labeled metabolites in extracts were generally observed. There was evidence of matrix effects including moderate suppression by other metabolites within the spectra of the labeled and unlabeled extracts. To improve the specificity and sensitivity of detection, optimized in situ ambient chemical reactions using DESI and extractive electrospray ionization (EESI) were carried out for targeted compounds. This study provides the first indication of the potential to perform in situ targeted metabolomics of a bacterial sample via ambient ionization mass spectrometry.
Co-reporter:Hao Chen ;LiviaS. Eberlin;Marcela Nefliu;Rodinei Augusti ;R.Graham Cooks
Angewandte Chemie International Edition 2008 Volume 47( Issue 18) pp:3422-3425
Publication Date(Web):
DOI:10.1002/anie.200800072
Co-reporter:Yu Xia;Zheng Ouyang ;R.Graham Cooks
Angewandte Chemie International Edition 2008 Volume 47( Issue 45) pp:8646-8649
Publication Date(Web):
DOI:10.1002/anie.200803477
Co-reporter:Hao Chen ;LiviaS. Eberlin;Marcela Nefliu;Rodinei Augusti ;R.Graham Cooks
Angewandte Chemie 2008 Volume 120( Issue 18) pp:3470-3473
Publication Date(Web):
DOI:10.1002/ange.200800072
Co-reporter:Yu Xia;Zheng Ouyang ;R.Graham Cooks
Angewandte Chemie 2008 Volume 120( Issue 45) pp:8774-8777
Publication Date(Web):
DOI:10.1002/ange.200803477
Co-reporter:Allison L. Dill;Nicholas E. Manicke;Demian R. Ifa
Science 2008 Volume 321(Issue 5890) pp:
Publication Date(Web):
DOI:10.1126/science.1157199

Abstract

Latent fingerprints (LFPs) potentially contain more forensic information than the simple identification of the subject; they may contain evidence of contacts with explosives or substances of abuse. Chemical information can also be useful in resolving overlapping LFPs from different individuals. We used desorption electrospray ionization mass spectrometry in an imaging mode to record compound-specific chemical fingerprints.

Co-reporter:Marcela Nefliu;Jonell N. Smith
Journal of The American Society for Mass Spectrometry 2008 Volume 19( Issue 3) pp:420-427
Publication Date(Web):2008 March
DOI:10.1016/j.jasms.2007.11.019
The internal energy distributions of typical ions generated by desorption electrospray ionization (DESI) were measured using the “survival yield” method, and compared with corresponding data for electrospray ionization (ESI) and electrosonic spray ionization (ESSI). The results show that the three ionization methods produce populations of ions having internal energy distributions of similar shapes and mean values (1.7–1.9 eV) suggesting similar phenomena, at least in the later stages of the process leading from solvated droplets to gas-phase ions. These data on energetics are consistent with the view that DESI involves “droplet pick-up” (liquid-liquid extraction) followed by ESI-like desolvation and gas-phase ion formation. The effects of various experimental parameters on the degree of fragmentation of p-methoxy-benzylpyridinium ions were compared between DESI and ESSI. The results show similar trends in the survival yields as a function of the nebulizing gas pressure, solvent flow rate, and distance from the sprayer tip to the MS inlet. These observations are consistent with the mechanism noted above and they also enable the user to exercise control over the energetics of the DESI ionization process, through manipulation of external and internal ion source parameters.
Co-reporter:Nicholas E. Manicke;Justin M. Wiseman
Journal of The American Society for Mass Spectrometry 2008 Volume 19( Issue 4) pp:531-543
Publication Date(Web):2008 April
DOI:10.1016/j.jasms.2007.12.003
Desorption electrospray ionization (DESI) mass spectrometry was evaluated for the characterization of glycerophospholipid standards, including glycerophosphocholine (GPCho), glycerophosphoglycerol (GPGro), glycerophosphoethanolamine (GPEtn), glycerophosphoserine (GPSer), glycerophosphoinositol (GPIns), cardiolipin (CL), and sphingolipid standards, including sulfatides (ST) and sphingomyelin (SM). Of specific interest were the effects of surface and solvent composition on signal stability and intensity, along with the ions observed in the full scan mode and the fragmentations seen upon collisional activation for each of the above classes. These experiments were performed without the addition of matrix compounds to the sample and were conducted in the free ambient environment at atmospheric pressure. The compounds GPSer, GPGro, GPIns, ST, and CL were best analyzed in the negative ion mode while PE was ionized efficiently in both positive and negative ion modes. SM and GPCho, which typically generate more abundant ions in the positive ion mode, could be analyzed in the negative ion mode by the addition of anionic reagents such as acetate to the spray solvent. Full scan DESI mass spectra and tandem (MS/MS) spectra for this representative set of physiological phospho/sphingolipids are presented. Similarities with other ionization methods in terms of fragmentation behavior were strong, although ambient ionization of untreated samples is only available with DESI. The effect of surface and solvent properties on signal intensity and stability were determined by depositing standard compounds on several different surfaces and analyzing with various proportions of methanol in the aqueous spray. Analysis was extended to complex mixtures of phospholipids and sphingolipids by examining the total lipid extract of porcine brain and by direct analysis of rat brain cryotome sections. These types of mixture analyses and molecular imaging studies are likely to represent major areas of application of DESI.
Co-reporter:Demian R. Ifa;Yongxin Zhu;Justin M. Wiseman;Candice B. Kissinger;Nicholas E. Manicke;Peter T. Kissinger
PNAS 2008 Volume 105 (Issue 47 ) pp:18120-18125
Publication Date(Web):2008-11-25
DOI:10.1073/pnas.0801066105
Ambient ionization methods for MS enable direct, high-throughput measurements of samples in the open air. Here, we report on one such method, desorption electrospray ionization (DESI), which is coupled to a linear ion trap mass spectrometer and used to record the spatial intensity distribution of a drug directly from histological sections of brain, lung, kidney, and testis without prior chemical treatment. DESI imaging provided identification and distribution of clozapine after an oral dose of 50 mg/kg by: i) measuring the abundance of the intact ion at m/z 327.1, and ii) monitoring the dissociation of the protonated drug compound at m/z 327.1 to its dominant product ion at m/z 270.1. In lung tissues, DESI imaging was performed in the full-scan mode over an m/z range of 200-1100, providing an opportunity for relative quantitation by using an endogenous lipid to normalize the signal response of clozapine. The presence of clozapine was detected in all tissue types, whereas the presence of the N-desmethyl metabolite was detected only in the lung sections. Quantitation of clozapine from the brain, lung, kidney, and testis, by using LC-MS/MS, revealed concentrations ranging from 0.05 μg/g (brain) to a high of 10.6 μg/g (lung). Comparisons of the results recorded by DESI with those by LC-MS/MS show good agreement and are favorable for the use of DESI imaging in drug and metabolite detection directly from biological tissues.
Co-reporter:Anthony B. Costa and R. Graham Cooks  
Chemical Communications 2007 (Issue 38) pp:3915-3917
Publication Date(Web):13 Aug 2007
DOI:10.1039/B710511H
Computational fluid dynamics is used to model atmospheric transport and droplet–thin film (surface) collisions in desorption electrospray ionization; experimentally obtained droplet properties are replicated in the simulations while a “droplet pick-up” mechanism of analyte transport is confirmed.
Co-reporter:Dina R. Justes, Nari Talaty, Ismael Cotte-Rodriguez and R. Graham Cooks  
Chemical Communications 2007 (Issue 21) pp:2142-2144
Publication Date(Web):27 Apr 2007
DOI:10.1039/B703655H
Single nanogram amounts of the explosives TNT, RDX, HMX, PETN and their mixtures were detected and identified in a few seconds on the surface of human skin without any sample preparation by desorption electrospray ionization (DESI) using a spray solution of methanol–water doped with sodium chloride to form the chloride adducts with RDX, HMX, and PETN while TNT was examined as the radical anion and tandem mass spectrometry was used to confirm the identifications.
Co-reporter:Richard H. Perry, Chunping Wu, Marcela Nefliu and R. Graham Cooks  
Chemical Communications 2007 (Issue 10) pp:1071-1073
Publication Date(Web):20 Dec 2006
DOI:10.1039/B616196K
Sublimation of near-racemic samples of serine yields a sublimate which is highly enriched in the major enantiomer; this simple one-step process occurs under relatively mild conditions, and represents a possible mechanism for the chiral amplification step in homochirogenesis.
Co-reporter:Yishu Song, Nari Talaty, W. Andy Tao, Zhengzheng Pan and R. Graham Cooks  
Chemical Communications 2007 (Issue 1) pp:61-63
Publication Date(Web):27 Nov 2006
DOI:10.1039/B615724F
Desorption electrospray ionization (DESI) allows the rapid acquisition of highly reproducible mass spectra from intact microorganisms under ambient conditions; application of principal component analysis to the data allows sub-species differentiation.
Co-reporter:Tiina J. Kauppila, Nari Talaty, Tiia Kuuranne, Tapio Kotiaho, Risto Kostiainen and R. Graham Cooks  
Analyst 2007 vol. 132(Issue 9) pp:868-875
Publication Date(Web):10 Jul 2007
DOI:10.1039/B703524A
Urine samples obtained from drug abusers were screened for drugs of abuse and their metabolites using DESI-MS and the results obtained were compared to results obtained from GC–MS experiments. The detected analyte classes included amphetamines, opiates, cannabinoids and benzodiazepines. The compounds detected were codeine, morphine, oxymorphone, 11-nor-9-carboxy-Δ9-tetrahydrocannabinol, Δ9-tetrahydrocannabinol, alprazolam, temazepam, oxazepam, N-desmethyldiazepam (nordiazepam) and hydroxytemazepam. Identities of all the analytes were confirmed by tandem mass spectrometry, matching MS/MS spectra with authentic standard compounds. The concentrations of the analytes in the samples were obtained from semi-quantitative GC–MS studies and were in the range of 270–22000 ng mL−1. The analytes could be detected by DESI even after a hundred-fold dilution indicating that the sensitivity of DESI was more than adequate for this study. Selectivity in the DESI-MS measurements for different kinds of analytes could be increased further by optimizing the spray solvent composition: the use of an entirely aqueous solvent enhanced the signal of polar analytes, such as the benzodiazepines, whereas the use of a spray solvent with a high organic content increased the signal of less polar analytes, such as codeine and morphine.
Co-reporter:D. R. Ifa, L. M. Gumaelius, L. S. Eberlin, N. E. Manicke and R. G. Cooks  
Analyst 2007 vol. 132(Issue 5) pp:461-467
Publication Date(Web):30 Mar 2007
DOI:10.1039/B700236J
Desorption electrospray ionization mass spectrometry (DESI-MS) is employed in the forensic analysis of documents. Blue ballpoint pen inks applied to ordinary writing paper are examined under ambient conditions without any prior sample preparation. When coupled to an automated moving stage, two-dimensional molecular images are generated. Proof-of-principle experiments include characterization of a simulated forged number and examination of older written records. This application of DESI has advantages over extractive techniques in terms of speed and sample preservation. The effects of the desorbing solvent composition, in this case a mixture of methanol and water, and of flow rate, are evaluated. Results suggest that the solubility of the analyte (dyes Basic Blue 7, Basic Violet 3 and Solvent Blue 26) plays an important role in desorption from the paper surface.
Co-reporter:Sergio C. Nanita;Ewa Sokol
Journal of The American Society for Mass Spectrometry 2007 Volume 18( Issue 5) pp:856-868
Publication Date(Web):2007 May
DOI:10.1016/j.jasms.2007.01.003
Serine solutions containing salts of alkali metals yield magic number clusters of the type (Ser4+C)+, (Ser8+C)+, (Ser12+C)+, and (Ser17+2C)+2 (where C = Li+, Na+, K+, Rb+, or Cs+), in relative abundances which are strongly dependent on the cation size. Strong selectivity for homochirality is involved in the formation of serine tetramers cationized by K+, Rb+, and Cs+. This is also the case for the octamers cationized by the smaller alkalis but there is a strong preference for heterochirality in the octamers cationized by the larger alkali cations. Tandem mass spectrometry shows that the octamers and dodecamers cationized by K+, Rb+, and Cs+ dissociate mainly by the loss of Ser4 units, suggesting that the neutral tetramers are the stable building blocks of the observed larger aggregates, (Ser8+C)+ and (Ser12+C)+. Remarkably, although the Ser4 units are formed with a strong preference for homochirality, they aggregate further regardless of their handedness and, therefore, with a preference for the nominally racemic 4D:4L structure and an overall strong heterochiral preference. The octamers cationized by K+, Rb+, or Cs+ therefore represent a new type of cluster ion that is homochiral in its internal subunits, which then assemble in a random fashion to form octamers. We tentatively interpret the homochirality of these tetramers as a consequence of assembly of the serine molecules around a central metal ion. The data provide additional evidence that the neutral serine octamer is homochiral and is readily cationized by smaller ions.
Co-reporter:Ayanna U. Jackson;Nari Talaty
Journal of The American Society for Mass Spectrometry 2007 Volume 18( Issue 12) pp:2218-2225
Publication Date(Web):2007 December
DOI:10.1016/j.jasms.2007.09.018
The salt tolerance of desorption electrospray ionization (DESI) was systematically investigated by examining three different drug mixtures in the presence of 0, 0. 2, 2, 5, 10, and 20% NaCl:KCl (1:1) from different surfaces. At physiological salt concentrations, the individual drugs in each mixture were observed in each experiment. Even at salt concentrations significantly above physiological levels, particular surfaces were effective in providing spectra that allowed the ready identification of the compounds of interest in low nanogram amounts. Salt adducts, which are observed even in the absence of added salt, could be eliminated by adding 0. 1% 7 M ammonium acetate to the standard methanol:water (1:1) spray solvent. Comparison of the salt tolerance of DESI with that of electrospray ionization (ESI) demonstrated better signal/noise characteristics for DESI. The already high salt tolerance of DESI can be optimized further by appropriate choices of surface and spray solution.
Co-reporter:Ismael Cotte-Rodríguez and R. Graham Cooks  
Chemical Communications 2006 (Issue 28) pp:2968-2970
Publication Date(Web):07 Jun 2006
DOI:10.1039/B606020J
Desorption electrospray ionization (DESI) mass spectrometry is used for the selective and sensitive detection of trace amounts of explosives and chemical warfare agent simulants from ambient surfaces at distances of up to 3 meters from the mass spectrometer.
Co-reporter:Christopher C. Mulligan, Nari Talaty and R. Graham Cooks  
Chemical Communications 2006 (Issue 16) pp:1709-1711
Publication Date(Web):15 Feb 2006
DOI:10.1039/B517357D
Desorption electrospray ionization (DESI) is implemented on a portable mass spectrometer and used to demonstrate in situ detection of active ingredients in pharmaceutical preparations, alkaloids in plant tissues, explosives, chemical warfare agent simulants and agricultural chemicals from a variety of surfaces; air monitoring applications using DESI are also introduced.
Co-reporter:Ismael Cotte-Rodríguez, Hao Chen and R. Graham Cooks  
Chemical Communications 2006 (Issue 9) pp:953-955
Publication Date(Web):12 Jan 2006
DOI:10.1039/B515122H
Desorption electrospray ionization (DESI) mass spectrometry is used for rapid, specific and sensitive detection of trace amounts of the notorious explosive TATP present on ambient surfaces by alkali metal complexation in a simple spray technique.
Co-reporter:Marcela Nefliu, Andre Venter and R. Graham Cooks  
Chemical Communications 2006 (Issue 8) pp:888-890
Publication Date(Web):19 Jan 2006
DOI:10.1039/B514057A
Desorption electrospray ionization (DESI) and electrosonic spray ionization (ESSI), two new techniques, are used to measure average molecular weights and molecular weight distributions of solid-phase and solution-phase samples of the same polymers.
Co-reporter:Hao Chen, Ismael Cotte-Rodríguez and R. Graham Cooks  
Chemical Communications 2006 (Issue 6) pp:597-599
Publication Date(Web):10 Jan 2006
DOI:10.1039/B516448F
Heterogeneous reactions at a solution/solid interface are utilized in an ambient mass spectrometry experiment to recognize the cis-diol functionality by its selective complexation reaction to form a cyclic boronate.
Co-reporter:Huanwen Chen, Andre Venter and R. Graham Cooks  
Chemical Communications 2006 (Issue 19) pp:2042-2044
Publication Date(Web):10 Apr 2006
DOI:10.1039/B602614A
On-line droplet–droplet extraction occurs when a sample spray intersects a reagent electrospray; this allows continuous analysis of trace amounts of compounds directly in complex matrices including undiluted urine, milk and polluted water over extended periods of time.
Co-reporter:Ismael Cotte-Rodríguez, Dina R. Justes, Sergio C. Nanita, Robert J. Noll, Christopher C. Mulligan, Nathaniel L. Sanders and R. Graham Cooks  
Analyst 2006 vol. 131(Issue 4) pp:579-589
Publication Date(Web):18 Jan 2006
DOI:10.1039/B513605A
The suitability of atmospheric pressure chemical ionization mass spectrometry as sensing instrumentation for the real-time monitoring of low levels of toxic compounds is assessed, especially with respect to public safety applications. Gaseous samples of nine toxic industrial compounds, NH3, H2S, Cl2, CS2, SO2, C2H4O, HBr, C6H6 and AsH3, and two chemical warfare agent simulants, dimethyl methylphosphonate (DMMP) and methyl salicylate (MeS), were studied. API-MS proves highly suited to this application, with speedy analysis times (<30 seconds), high sensitivity, high selectivity towards analytes, good precision, dynamic range and accuracy. Tandem MS methods were implemented in selected cases for improved selectivity, sensitivity, and limits of detection. Limits of detection in the parts-per-billion and parts-per-trillion range were achieved for this set of analytes. In all cases detection limits were well below the compounds' permissible exposure limits (PELs), even in the presence of added complex mixtures of alkanes. Linear responses, up to several orders of magnitude, were obtained over the concentration ranges studied (sub-ppb to ppm), with relative standard deviations less than 3%, regardless of the presence of alkane interferents. Receiver operating characteristic (ROC) curves are presented to show the performance trade-off between sensitivity, probability of correct detection, and false positive rate. A dynamic sample preparation system for the production of gas phase analyte concentrations ranging from 100 pptr to 100 ppm and capable of admixing gaseous matrix compounds and control of relative humidity and temperature is also described.
Co-reporter:Christopher C. Mulligan, Dina R. Justes, Robert. J. Noll, Nathaniel L. Sanders, Brian C. Laughlin and R. Graham Cooks  
Analyst 2006 vol. 131(Issue 4) pp:556-567
Publication Date(Web):28 Feb 2006
DOI:10.1039/B517541K
A portable tandem mass spectrometer, capable of performing atmospheric pressure chemical ionization (APCI) using a direct atmospheric inlet, is applied to the real-time monitoring of toxic compounds in air. Analytes of interest include dimethyl methylphosphonate, arsine, benzene, toluene, pyridine and vinyl acetate. The detection, identification and quantification of organic and inorganic compounds in air is demonstrated using short analysis times (<5 seconds) with detection limits in the low ppb (v/v) levels and linear dynamic ranges of several orders of magnitude. Highly specific detection and identification is achieved, even when the analyte is a trace component in a complex mixture including such interferents as fuels, lubricants, and cleaners. The effects of environmental conditions, including temperature and humidity, are delineated. Receiver operating characteristic (ROC) curves are presented to show the trade-off between false positive and false negative detection rates. Tandem mass spectrometry based both on collision-induced dissociation and on selective atmospheric pressure ion/molecule reactions is also used to increase selectivity and sensitivity.
Co-reporter:Amy M. Tabert, Michael P. Goodwin, R. Graham Cooks
Journal of the American Society for Mass Spectrometry 2006 Volume 17(Issue 1) pp:56-59
Publication Date(Web):January 2006
DOI:10.1016/j.jasms.2005.09.005
A method is reported for evaluating ion trap mass analyzers by selection of operating conditions under which both boundary and resonance ejection peaks occur in a single mass scan. The choice of frequency and amplitude of the auxiliary waveform applied for resonance ejection can be such as to produce a resonance ejection mass spectrum with unit resolution or, under selected conditions, signals attributable to both boundary and resonance ejection in a single mass scan. The contrasting mass resolution associated with these two ejection processes is evident in these data. The co-occurrence of the two ejection phenomena is ascribed to the effects of higher-order fields; it is more marked in some rectilinear ion traps (RITs) than in other nominally identical devices, leading to the possibility of using it to compare individual mass analyzers in multiplexed instruments. The method is used to compare multiple ion traps driven by the same RF signal in a fully-multiplexed mass spectrometer, composed of parallel ion source/mass analyzer/detector channels each housed in one quadrant of a specialized vacuum chamber.
Co-reporter:Yishu Song, Guangxiang Wu, Qingyu Song, R. Graham Cooks, Zheng Ouyang, Wolfgang R. Plass
Journal of the American Society for Mass Spectrometry 2006 Volume 17(Issue 4) pp:631-639
Publication Date(Web):April 2006
DOI:10.1016/j.jasms.2005.12.014
A novel linear ion trap mass analyzer was developed using just four elongated planar electrodes, mounted in parallel, and employing an RF potential for ion trapping in the radial and axial directions. Mass analysis was achieved using the mass-selective instability scan with ion ejection in the radial direction. The performance of this new device was characterized in comparison with the 6-electrode rectilinear ion trap (RIT) from which it is derived. The 4-electrode trap gives optimum performance in an asymmetric geometry, just like the original optimized 6-electrode RIT. The strong RF fringing fields at the ends of the RF rods account for axial ion trapping without use of extra electrodes or an axial DC voltage. Field calculations and simulations have been carried out to study the trapping potential inside RITs with various configurations. Demonstrated capabilities include analysis of externally injected ions with mass resolution in excess of 1000 and a mass/charge range of 650 Th as well as tandem mass spectrometry capabilities. The geometric simplicity and performance characteristics of the 4-electrode RIT make it particularly attractive in the development of next generation miniaturized mass spectrometers.
Co-reporter:Marcela Nefliu, R. Graham Cooks, Colin Moore
Journal of the American Society for Mass Spectrometry 2006 Volume 17(Issue 8) pp:1091-1095
Publication Date(Web):August 2006
DOI:10.1016/j.jasms.2006.04.021
A signal enhancement of two orders of magnitude was achieved when reactive desorption electrospray ionization (DESI) was used to investigate copper(II) dibutyl dithiocarbamate, Cu(II)(bu2dtc)2, found in a specialized polymer. Cu(II) was oxidized to Cu(III) during the DESI experiment by oxidants in the spray solvent. Such oxidants could be present or formed during electrospray (e.g., O2) or deliberately added to the spray solvent (this approach is called reactive DESI). When a strong oxidizing agent (e.g., iodine) was added to the spray solvent, the signal increased by two orders of magnitude relative to the pure solvent spray. The correlation between the standard reduction potential of the oxidant and the signal intensity and signal to noise ratio of the product ion for various reagents, was tested and discussed. The observed DESI enhancements in rates of oxidation are not observed in homogeneous solution. The major peaks in the collision induced dissociation (CID) spectrum of the complex ion Cu(III)(bu2dtc)2]+ were identified using isotopic distributions and MS3 data.
Co-reporter:Guangxiang Wu, Robert J. Noll, Wolfgang R. Plass, Qizhi Hu, Richard H. Perry, R. Graham Cooks
International Journal of Mass Spectrometry 2006 Volume 254(1–2) pp:53-62
Publication Date(Web):15 July 2006
DOI:10.1016/j.ijms.2006.05.007
The newly developed version of the multi-particle ion trajectory simulation program, ITSIM 6.0, was applied to simulate ac dipolar excitation of ion axial motion in the Orbitrap. The Orbitrap inner and outer electrodes were generated in AutoCAD, a 3D drawing program. The electrode geometry was imported into the 3D field solver COMSOL; the field array was then imported into ITSIM 6.0. Ion trajectories were calculated by solving Newton's equations using Runge–Kutta integration methods. Compared to the analytical solution, calculated radial components of the field at the device's “equator” (z = 0) were within 0.5% and calculated axial components midway between the inner and outer electrodes were within 0.2%.The experiments simulated here involved the control of axial motion of ions in the Orbitrap by the application of dipolar ac signals to the split outer electrodes, as described in a recently published paper from this laboratory [Hu et al., J. Phys. Chem. A 110 (2006) 2682]. In these experiments, ac signal was applied at the axial resonant frequency of a selected ion. Axial excitation and eventual ion ejection resulted when the ac was in phase with, i.e., had 0° phase relative to ion axial motion. De-excitation of ion axial motion until the ions were at z = 0 and at rest with respect to the z-axis resulted if the applied ac was out of phase with ion motion, with re-excitation of ion axial motion occurring if the dipolar ac was continued beyond this point. Both de-excitation and re-excitation could be achieved mass-selectively and depended on the amplitude and duration (number of cycles) of the applied ac. The effects of ac amplitude, frequency, phase relative to ion motion, and bandwidth of applied waveform were simulated. All simulation results were compared directly with the experimental data and good agreement was observed. Such ion motion control experiments and their simulation provide the possibility to improve Orbitrap performance and to develop tandem mass spectrometry (MS/MS) capabilities inside the Orbitrap.
Co-reporter:Rodinei Augusti, Hao Chen, Livia Schiavinato Eberlin, Marcela Nefliu, R. Graham Cooks
International Journal of Mass Spectrometry 2006 Volume 253(Issue 3) pp:281-287
Publication Date(Web):1 July 2006
DOI:10.1016/j.ijms.2006.05.005
The Eberlin reaction, the ionic transacetalization of cyclic acetals and analogues with acylium and related ions, is demonstrated in the course of ion/molecule reactions at atmospheric pressure. Selected gaseous acetals (1,3-dioxolane, 2-methyl-1,3-dioxolane, 2,2-dimethyl-1,3-dioxolane, 4-methyl-1,3-dioxolane, 2-phenyl-1,3-dioxolane, 1,3-dioxane, and 1,3,5-trioxane) react efficiently with the (CH3)2NCO+ acylium ion, generated by electrosonic spray ionization (ESSI) of an aqueous/methanol solution of tetramethylurea (TMU), to furnish the characteristic cyclic ionic acetals, the Eberlin products, in moderate to high yields. It is proposed that acylium ions on the surface of the ESSI-generated droplets interact with gaseous neutral reagents. The Eberlin products dissociate exclusively to re-form the reactant (CH3)2NCO+ acylium ion upon collision-induced dissociation (CID), confirming their structures. The intact adduct, i.e., acylium ion plus neutral reagent (the stable precursor of the Eberlin product), is observed in these experiments whereas it is not observed in studies of the same Eberlin reactions under conventional reduced pressure ion/molecule reaction conditions. It is suggested that under atmospheric pressure conditions these intact adducts are likely stabilized through deactivation via collision with buffer gas.
Co-reporter:Justin M. Wiseman;Demian R. Ifa Dr.;Qingyu Song
Angewandte Chemie International Edition 2006 Volume 45(Issue 43) pp:
Publication Date(Web):26 SEP 2006
DOI:10.1002/anie.200602449

Images of the masses: Two-dimensional molecular imaging of intact rat brain tissue under ambient conditions was achieved by using the mass spectrometric technique of desorption electrospray ionization (DESI). The distributions of specific lipids, such as sulfatide 24:1, reveal distinctive subanatomical features of the rat brain (cc=corpus callosum; aca=anterior part of anterior commissure) with spatial resolution of less than 500 μm.

Co-reporter:Sergio C. Nanita Dr. Dr.
Angewandte Chemie 2006 Volume 118(Issue 4) pp:
Publication Date(Web):11 JAN 2006
DOI:10.1002/ange.200501328

Noch immer ist die Entwicklung der Homochiralität eines der spannendsten Rätsel im Zusammenhang mit der Entstehung des Lebens. Ein mögliches Szenario geht davon aus, dass Aminosäure-Aggregate an einer Folge chemischer Ereignisse beteiligt waren, die zu chiralen Biomolekülen in sich selbst replizierenden Systemen und damit zur Homochirogenese führten. Serin steht als Aminosäure im Zentrum des Interesses, weil es ionische Cluster bildet, die sich aus der “magischen” Zahl von acht Aminosäureeinheiten zusammensetzen; diese Cluster zeigen eine auffällige Präferenz für Homochiralität. Die Serinoctamer-Cluster (Ser8) können unter simulierten präbiotischen Bedingungen erzeugt werden, und sie reagieren enantioselektiv mit anderen Biomolekülen. Diese Beobachtungen führten zu der Hypothese, dass die Chiralität in der Natur ursprünglich auf Serin zurückgeht und durch chemische Reaktionen auf andere Aminosäuren, Saccharide und Peptide übertragen wurde. Der vorliegende Aufsatz bewertet kritisch die Chemie von Ser8-Clustern und die Experimente, die ihre mögliche Rolle bei der Homochirogenese stützen.

Co-reporter:Justin M. Wiseman;Demian R. Ifa Dr.;Qingyu Song
Angewandte Chemie 2006 Volume 118(Issue 43) pp:
Publication Date(Web):26 SEP 2006
DOI:10.1002/ange.200602449

Bilder nach Masse: Die zweidimensionale molekulare Bildgebung von intaktem Rattenhirngewebe unter Umgebungsbedingungen gelingt mithilfe von Desorptionselektrosprayionisations(DESI)-Massenspektrometrie. Die Verteilung einzelner Lipide, wie Sulfatid 24:1, deckt unverkennbare subanatomische Merkmale des Rattenhirns mit einer Auflösung unter 500 μm auf (cc=Corpus Callosum; aca=vorderer Teil der Commissura anterior).

Co-reporter:Hao Chen Dr.;Zheng Ouyang Dr.
Angewandte Chemie International Edition 2006 Volume 45(Issue 22) pp:
Publication Date(Web):26 APR 2006
DOI:10.1002/anie.200600660

The heat is on: Thermal ionization of a variety of organic salts including ionic liquids and transition-metal salts occurs at atmospheric pressure. This thermal method allows for the study of ion–molecule reactions; for example, the fast selective desorption and derivatization of D-lysine occurs when thermally generated pyrylium ions react with solid lysine under ambient conditions (see picture).

Co-reporter:Hao Chen Dr.;Zheng Ouyang Dr.
Angewandte Chemie 2006 Volume 118(Issue 22) pp:
Publication Date(Web):26 APR 2006
DOI:10.1002/ange.200600660

Heiße Ionen: Die thermische Ionisierung einer Vielzahl organischer Salze einschließlich ionischer Flüssigkeiten und Übergangsmetallsalze bei Atmosphärendruck ermöglicht die Untersuchung von Ion-Molekül-Reaktionen. Beispielsweise beobachtet man die schnelle, selektive Desorption und Derivatisierung von D-Lysin, wenn thermisch erzeugte Pyryliumionen mit festem Lysin unter Umgebungsbedingungen reagieren (siehe Bild).

Co-reporter:Sergio C. Nanita,R. Graham Cooks
Angewandte Chemie International Edition 2006 45(4) pp:554-569
Publication Date(Web):
DOI:10.1002/anie.200501328
Co-reporter:R. Graham Cooks;Zheng Ouyang;Zoltan Takats;Justin M. Wiseman
Science 2006 Vol 311(5767) pp:1566-1570
Publication Date(Web):17 Mar 2006
DOI:10.1126/science.1119426

Abstract

A recent innovation in mass spectrometry is the ability to record mass spectra on ordinary samples, in their native environment, without sample preparation or preseparation by creating ions outside the instrument. In desorption electrospray ionization (DESI), the principal method described here, electrically charged droplets are directed at the ambient object of interest; they release ions from the surface, which are then vacuumed through the air into a conventional mass spectrometer. Extremely rapid analysis is coupled with high sensitivity and high chemical specificity. These characteristics are advantageously applied to high-throughput metabolomics, explosives detection, natural products discovery, and biological tissue imaging, among other applications. Future possible uses of DESI for in vivo clinical analysis and its adaptation to portable mass spectrometers are described.

Co-reporter:Igor A. Popov, Hao Chen, Oleg N. Kharybin, Eugene N. Nikolaev and R. Graham Cooks  
Chemical Communications 2005 (Issue 15) pp:1953-1955
Publication Date(Web):10 Mar 2005
DOI:10.1039/B419291E
A simple, fast and direct method is presented for detecting traces of solid explosives on cotton swabs or in particulate samples: ions are transferred into a mass spectrometer after thermal desorption and corona discharge chemical ionization in ambient air; specificity is enhanced using ambient ion/molecule reactions or by conventional tandem mass spectrometry.
Co-reporter:Ismael Cotte-Rodríguez, Eric Handberg, Robert J. Noll, David P. A. Kilgour and R. Graham Cooks  
Analyst 2005 vol. 130(Issue 5) pp:679-686
Publication Date(Web):18 Mar 2005
DOI:10.1039/B417791F
The use of two methods in tandem, single-sided membrane introduction mass spectrometry (SS-MIMS) and fiber introduction mass spectrometry (FIMS), is presented as a technique for field analysis. The combined SS-MIMS-FIMS technique was employed in both a modified commercial mass spectrometer and a miniature mass spectrometer for the selective preconcentration of the explosive simulant o-nitrotoluene (ONT) and the chemical warfare agent simulant, methyl salicylate (MeS), in air. A home-built FIMS inlet was fabricated to allow introduction of the solid-phase microextraction (SPME) fiber into the mass spectrometer chamber and subsequent desorption of the trapped compounds using resistive heating. The SS-MIMS preconcentration system was also home-built from commercial vacuum parts. Optimization experiments were done separately for each preconcentration system to achieve the best extraction conditions prior to use of the two techniques in combination. Improved limits of detection, in the low ppb range, were observed for the combination compared to FIMS alone, using several SS-MIMS preconcentration cycles. The SS-MIMS-FIMS response for both instruments was found to be linear over the range 50 to 800 ppb. Other parameters studied were absorption time profiles, effects of sample flow rate, desorption temperature, fiber background, memory effects, and membrane fatigue. This simple, sensitive, accurate, robust, selective, and rapid sample preconcentration and introduction technique shows promise for field analysis of low vapor pressure compounds, where analyte concentrations will be extremely low and the compounds are difficult to extract from a matrix like air.
Co-reporter:Bogdan Gologan, Jason R. Green, Jormarie Alvarez, Julia Laskin and R. Graham Cooks  
Physical Chemistry Chemical Physics 2005 vol. 7(Issue 7) pp:1490-1500
Publication Date(Web):08 Feb 2005
DOI:10.1039/B418056A
Ion/surface collision phenomena in the hyperthermal collision energy regime (1–100 eV) are reviewed, with emphasis on chemical processes associated with the impact of small organic and biological ions at functionalized self-assembled monolayer surfaces. Inelastic collisions can lead to excitation of the projectile ion and can result in fragmentation, a process known as surface-induced dissociation which is useful in chemical analysis using tandem mass spectrometry. Changes in charge can accompany ion/surface collisions and those associated with a change in polarity (positive to negative ions or vice versa) are an attractive method for ion structural characterization and isomer differentiation. The surface-induced charge inversion of nitrobenzene and other substituted aromatics is discussed. Reactive collisions occurring between gaseous ions and surfaces depend on the chemical nature of the collision partners. These reactions can be used for selected chemical modifications of surfaces as well as for surface analysis. Particular emphasis is given here to ion soft-landing, another type of ion/surface interaction, in which the projectile ion is landed intact at the surface, either as the corresponding neutral molecule or, interestingly but less commonly, in the form of the ion itself. The ion soft-landing experiment allows for preparative mass spectrometry; for example the preparation of pure biological compounds by using the mass spectrometer as a separation device. After separation, the mass-selected ions are collected by soft-landing, at different spatial points in an array. If the experiment is performed using a suitable liquid medium, in the case of some proteins at least, biological activity is retained.
Co-reporter:Nari Talaty, Zoltán Takáts and R. Graham Cooks  
Analyst 2005 vol. 130(Issue 12) pp:1624-1633
Publication Date(Web):19 Oct 2005
DOI:10.1039/B511161G
Desorption electrospray ionization (DESI) mass spectrometry is applied to the in situ detection of alkaloids in the tissue of poison hemlock (Conium maculatum), jimsonweed (Datura stramonium) and deadly nightshade (Atropa belladonna). The experiment is carried out by electrospraying micro-droplets of solvent onto native or freshly-cut plant tissue surfaces. No sample preparation is required and the mass spectra are recorded under ambient conditions, in times of a few seconds. The impact of the sprayed droplets on the surface produces gaseous ions from organic compounds originally present in the plant tissue. The effects of operating parameters, including the electrospray high voltage, heated capillary temperature, the solvent infusion rate and the carrier gas pressure on analytical performance are evaluated and optimized. Different types of plant material are analyzed including seeds, stems, leaves, roots and flowers. All the previously reported alkaloids have been detected in C. maculatum, while fifteen out of nineteen known alkaloids for D. stramonium and the principal alkaloids of A. belladonna were also identified. All identifications were confirmed by tandem mass spectrometry. Results obtained show similar mass spectra, number of alkaloids, and signal intensities to those obtained when extraction and separation processes are performed prior to mass spectrometric analysis. Evidence is provided that DESI ionization occurs by both a gas-phase ionization process and by a droplet pick-up mechanism. Quantitative precision of DESI is compared with conventional electrospray ionization mass spectrometry (after sample workup) and the RSD values for the same set of 25 dicotyledonous C. maculatum seeds (one half of each seed analyzed by ESI and the other by DESI) are 9.8% and 5.2%, respectively.
Co-reporter:Justin M. Wiseman, Satu M. Puolitaival, Zoltán Takáts, R. Graham Cooks,Richard M. Caprioli
Angewandte Chemie International Edition 2005 44(43) pp:7094-7097
Publication Date(Web):
DOI:10.1002/anie.200502362
Co-reporter:Justin M. Wiseman, Satu M. Puolitaival, Zoltán Takáts, R. Graham Cooks,Richard M. Caprioli
Angewandte Chemie International Edition 2005 44(43) pp:6967
Publication Date(Web):
DOI:10.1002/anie.200590143
Co-reporter:Justin M. Wiseman;Zoltán Takáts;Bogdan Gologan;V. J. Davisson
Angewandte Chemie International Edition 2005 Volume 44(Issue 6) pp:
Publication Date(Web):28 DEC 2004
DOI:10.1002/anie.200461672

It's a phase it's going through: Electrosonic spray ionization shows better desolvation efficiency than electrospray ionization and usually gives single-charge states when used to ionize noncovalent complexes of large biomolecules. The binary and ternary complexes of imidazole-3-glycerol phosphate synthase (IGPS) with its inhibitors appear to retain their native solution-phase conformations upon transfer into the gas phase (see picture).

Co-reporter:Justin M. Wiseman;Satu M. Puolitaival;Zoltán Takáts Dr. ;Richard M. Caprioli
Angewandte Chemie 2005 Volume 117(Issue 43) pp:
Publication Date(Web):31 OCT 2005
DOI:10.1002/ange.200590142
Co-reporter:Justin M. Wiseman;Satu M. Puolitaival;Zoltán Takáts Dr. ;Richard M. Caprioli
Angewandte Chemie 2005 Volume 117(Issue 43) pp:
Publication Date(Web):31 OCT 2005
DOI:10.1002/ange.200502362

Die direkte chemische Profilierung biologischer Gewebeproben, unter anderem von metastasenbildendem humanem Leberadenom, gelang durch Massenspektrometrie unter Standardbedingungen. Bei Desorptionselektrospray-Ionisierung zeigten sich intensivere Signale für Sphingolipide und stärker ungesättigte Phospholipide in der Tumorregion des Gewebes (siehe Bild).

Co-reporter:Justin M. Wiseman;Zoltán Takáts;Bogdan Gologan;V. J. Davisson
Angewandte Chemie 2005 Volume 117(Issue 6) pp:
Publication Date(Web):28 DEC 2004
DOI:10.1002/ange.200461672

Der bessere Weg: Die Elektroschall-Spray-Ionisierung ist bei der Desolvatisierung effizienter als die Elektrospray-Ionisierung und liefert bei der Ionisierung nichtkovalenter Komplexe großer Biomoleküle normalerweise einfach geladene Ionen. Die binären und ternären Komplexe von Imidazol-3-glycerinphosphat-Synthase (IGPS) mit ihren Inhibitoren scheinen die native Lösungskonformation beim Übergang in die Gasphase beizubehalten (siehe Bild).

Co-reporter:Zoltán Takáts;Justin M. Wiseman;Bogdan Gologan
Science 2004 Vol 306(5695) pp:471-473
Publication Date(Web):15 Oct 2004
DOI:10.1126/science.1104404

Abstract

A new method of desorption ionization is described and applied to the ionization of various compounds, including peptides and proteins present on metal, polymer, and mineral surfaces. Desorption electrospray ionization (DESI) is carried out by directing electrosprayed charged droplets and ions of solvent onto the surface to be analyzed. The impact of the charged particles on the surface produces gaseous ions of material originally present on the surface. The resulting mass spectra are similar to normal ESI mass spectra in that they show mainly singly or multiply charged molecular ions of the analytes. The DESI phenomenon was observed both in the case of conductive and insulator surfaces and for compounds ranging from nonpolar small molecules such as lycopene, the alkaloid coniceine, and small drugs, through polar compounds such as peptides and proteins. Changes in the solution that is sprayed can be used to selectively ionize particular compounds, including those in biological matrices. In vivo analysis is demonstrated.

Co-reporter:Hao Chen, Xubin Zheng, Pengxiang Yang and R. Graham Cooks  
Chemical Communications 2004 (Issue 6) pp:688-689
Publication Date(Web):12 Feb 2004
DOI:10.1039/B314713D
The title reduction of nitroaromatics ArNO2 by vinyl halide radical cations CH2CH–X+˙ (X = Cl or Br) to form arylnitrenium ions ArNH+ involves a change in oxidation number of nitrogen from +3 to −1. This novel reaction provides a new route for the generation of arylnitrenium ions, a highly selective method for the detection of explosives in mixtures, and offers clues to the carcinogenic activity of nitroaromatics in vivo.
Co-reporter:Zoltán Takáts and R. Graham Cooks  
Chemical Communications 2004 (Issue 4) pp:444-445
Publication Date(Web):23 Jan 2004
DOI:10.1039/B316768B
Vigorous evaporation of aqueous serine solutions yields abundant protonated serine octamer ions. So does pyrolysis of L-serine crystals in a corona discharge.
Co-reporter:Eduardo C. Meurer, Hao Chen, Leah Riter, Ismael Cotte-Rodriguez, Marcos N. Eberlin and R. Graham Cooks  
Chemical Communications 2004 (Issue 1) pp:40-41
Publication Date(Web):20 Nov 2003
DOI:10.1039/B309962H
Highly selective gas-phase reactions with ethyl vinyl ether (EVE) of major electron (EI) and chemical ionization (CI) fragment ions of the explosives TNT and RDX have been uncovered. The fragment ion of m/z 210 from TNT undergoes [4+ + 2] cycloaddition with EVE to form an oxo-iminium ion of m/z 282, which dissociates by acetaldehyde loss after a [1,5-H] shift to form a quinolynium ion of m/z 238. The fragment ion of m/z 149 from RDX reacts with EVE by a formal vinylation reaction, that is, the elusive cyclic adduct loses ethanol to yield a nitro-iminium ion of m/z 175, which reacts further with EVE to form a second cyclic product ion of m/z 247. Calculations and MS/MS experiments support the proposed structures. These highly characteristic reactions of diagnostic EI and CI fragment ions improve selectivity for TNT and RDX detection.
Co-reporter:Habib Bagheri, Hao Chen and R. Graham Cooks  
Chemical Communications 2004 (Issue 23) pp:2740-2741
Publication Date(Web):15 Oct 2004
DOI:10.1039/B410882E
A simple, rapid tandem mass spectrometric method for recognition of chiral molecules by proton transfer reactions with chiral sec-butylamines and sec-butanols is reported.
Co-reporter:Amy M. Tabert, Alexander S. Misharin and R. Graham Cooks  
Analyst 2004 vol. 129(Issue 4) pp:323-330
Publication Date(Web):19 Feb 2004
DOI:10.1039/B314178K
The performance of a multiplexed array of miniature cylindrical ion trap (CIT) mass spectrometers composed of four identical sets of ion source/mass analyzer/detector channels is evaluated. Each miniature cylindrical ion trap (inner radius 2.5 mm) was coupled to an external chemical ionization/electron ionization (CI/EI) source and a miniature (inner diameter 2 mm) electron multiplier. The sample introduction system permits delivery of samples and reagent gases directly into any one or more of the ionization volumes. Experimental conditions were optimized as required for CI to occur in one or more ion volumes. The ion source potential was observed to affect the energy of [M + H]+ ions generated by self-chemical ionization in the external ion sources and, thus, the degree of fragmentation observed in resulting mass spectra. The versatility of this novel instrumentation permits two types of multi-channel experiments. In the first, different samples are analyzed at the same time in identical, parallel channels for high-throughput mass analysis using CI. In the second, the instrument is used for improved specificity in the analysis of a single sample by simultaneous measurements made with multiple methods of ionization, including EI and methane CI in adjacent channels of the instrument.
Co-reporter:Matthew G. Blain, Leah S. Riter, Dolores Cruz, Daniel E. Austin, Guangxiang Wu, Wolfgang R. Plass, R. Graham Cooks
International Journal of Mass Spectrometry 2004 Volume 236(1–3) pp:91-104
Publication Date(Web):August 2004
DOI:10.1016/j.ijms.2004.06.011
Breakthrough improvements in simplicity and reductions in the size of mass spectrometers are needed for high-consequence fieldable applications, including error-free detection of chemical/biological warfare agents, medical diagnoses, and explosives and contraband discovery. These improvements are most likely to be realized with the reconceptualization of the mass spectrometer, rather than by incremental steps towards miniaturization. Microfabricated arrays of mass analyzers represent such a conceptual advance. A massively parallel array of micrometer-scaled mass analyzers on a chip has the potential to set the performance standard for hand-held sensors due to the inherit selectivity, sensitivity, and universal applicability of mass spectrometry as an analytical method. While the effort to develop a complete micro-MS system must include innovations in ultra-small-scale sample introduction, ion sources, mass analyzers, detectors, and vacuum and power subsystems, the first step towards radical miniaturization lies in the design, fabrication, and characterization of the mass analyzer itself. In this paper we discuss design considerations and results from simulations of ion trapping behavior for a micrometer scale cylindrical ion trap (CIT) mass analyzer (internal radius r0 = 1 μm). We also present a description of the design and microfabrication of a 0.25 cm2 array of 106 one-micrometer CITs, including integrated ion detectors, constructed in tungsten on a silicon substrate.
Co-reporter:Lianming Wu, Eduardo Cesar Meurer, Brandy Young, Pengxiang Yang, Marcos N. Eberlin, R.Graham Cooks
International Journal of Mass Spectrometry 2004 Volume 231(2–3) pp:103-111
Publication Date(Web):February 2004
DOI:10.1016/j.ijms.2003.09.017
The kinetic method is applied to differentiate and quantify mixtures of isomeric tripeptides by generating and mass-selecting alkali metal ion-bound dimeric clusters and examining their competitive dissociations in an ion trap mass spectrometer. This methodology readily distinguishes the pairs of isomers examined here: (α-A)GG/(β-A)GG, G(α-A)G/G(β-A)G, and GG(α-A)/GG(β-A). The isomeric selectivity increases with decreasing size of the metal ion, viz. from Cs to Rb to K to Na to Li. When alanine is at the N-terminus, as in the case of (α-A)GG/(β-A)GG, the isomeric selectivity can exceed 103. The corresponding proton-bound dimers behave similarly to the Li clusters. Structural features that favor zwitterionic versus charge-solvated forms of the alkali metal-bound clusters are reflected in the bn and yn fragment ion abundances recorded by tandem mass spectrometry, and the propensities to form the charge-solvated or zwitterionic structures play a key role in promoting isomeric differentiation. The zwitterionic forms favor intramolecular interactions in the cluster and hence isomeric distinction. There is no discrimination in the formation of the alkali metal-bound dimers, so isomeric quantification is based entirely on dissociation kinetics. Previous kinetic method-based isomeric analyses have used the trimeric clusters and shown linear correlations between composition of the mixture of isomers and the logarithm of the branching ratio for competitive fragmentation. A similar relationship is found for the dimeric clusters examined here. As used here, the kinetic method provides a possible way for future quantitative analysis of mixtures of larger peptides such as those generated in combinatorial synthesis of peptides and peptide mimics.
Co-reporter:Zheng Ouyang;Zoltán Takáts;Thomas A. Blake;Bogdan Gologan;Andy J. Guymon;Justin M. Wiseman;Justin C. Oliver;V. Jo Davisson
Science 2003 Vol 301(5638) pp:1351-1354
Publication Date(Web):05 Sep 2003
DOI:10.1126/science.1088776

Abstract

Intact, multiply protonated proteins of particular mass and charge were selected from ionized protein mixtures and gently landed at different positions on a surface to form a microarray. An array of cytochrome c, lysozyme, insulin, and apomyoglobin was generated, and the deposited proteins showed electrospray ionization mass spectra that matched those of the authentic compounds. Deposited lysozyme and trypsin retained their biological activity. Multiply charged ions of protein kinase A catalytic subunit and hexokinase were also soft-landed into glycerol-based liquid surfaces. These soft-landed kinases phosphorylated LRRASLG oligopeptide and D-fructose, respectively.

Co-reporter:Lianming Wu, Rebecca L. Clark and R. Graham Cooks  
Chemical Communications 2003 (Issue 1) pp:136-137
Publication Date(Web):03 Dec 2002
DOI:10.1039/B210294C
Accurate quantification of the optical isomers in a ternary mixture of D-, L-, and meso-tartaric acids is achieved using electrospray ionization tandem mass spectrometry for in-situ metal complex formation and a three-point calibration method to quantify the dissociation kinetics.
Co-reporter:Rodinei Augusti, Maciej Turowski and R. Graham Cooks  
Analyst 2003 vol. 128(Issue 1) pp:61-64
Publication Date(Web):04 Dec 2002
DOI:10.1039/B208770G
Membrane introduction mass spectrometry (MIMS) was used to monitor complexation reactions between β-cyclodextrin (CD) and a series of benzene derivatives in aqueous solution. The equilibrium constants for benzene, chlorobenzene, bromobenzene, iodobenzene, toluene, cyanobenzene and nitrobenzene were determined. The suitability of MIMS for monitoring complexation reactions of organic compounds with host molecules was demonstrated. Structure–activity relationship analysis shows that the inclusion phenomena are driven by a variety of chemical forces, of which hydrophobicity is predominant for non-polar compounds, but not the only factor for more polar ones.
Co-reporter:Leah S. Riter, Eduardo C. Meurer, Ismael Cotte-Rodriguez, Marcos N. Eberlin and R. Graham Cooks  
Analyst 2003 vol. 128(Issue 9) pp:1119-1122
Publication Date(Web):15 Aug 2003
DOI:10.1039/B308292J
Fiber introduction mass spectrometry (FIMS), a variation of solid-phase microextraction (SPME) and membrane introduction mass spectrometry (MIMS), is employed with a miniature mass spectrometer. The inlet system, constructed of commercially available vacuum parts, allows the direct introduction of the SPME needle vacuum chamber into the mass spectrometer. Thermal desorption of the analyte from the poly(dimethylsiloxane) (PDMS) coated fiber was achieved with a built in nichrome heater, followed by electron ionization of the analytes internal to the cylindrical ion trap (CIT). The system has been tested with several volatile organic compounds (VOC) in air and to analyze the headspace over aqueous solutions, with limits of detection in the low ppb range. The signal rise (10–90%) and fall (90–10%) times for the system ranged from 0.1 to 1 s (rise) and 1.2 to 6 s (fall) using heated desorption. In addition, this method has been applied to quantitation of toluene in benzene, toluene, xylene (BTX) mixtures in water and gasoline. This simple and rapid analysis method, coupled to a portable mass spectrometer, has been shown to provide a robust, simple, rapid, reproducible, accurate and sensitive (low ppb range) fieldable approach to the effective in situ analysis of VOC in various matrices.
Co-reporter:Leah S. Riter, Eduardo C. Meurer, Eric S. Handberg, Brian C. Laughlin, Hao Chen, Garth E. Patterson, Marcos N. Eberlin and R. Graham Cooks  
Analyst 2003 vol. 128(Issue 9) pp:1112-1118
Publication Date(Web):29 Jul 2003
DOI:10.1039/B303609J
A recently constructed miniature mass spectrometer, based on a cylindrical ion trap (CIT) mass analyzer, is used to perform ion/molecule reactions in order to improve selectivity for in situ analysis of explosives and chemical warfare agent simulants. Six different reactions are explored, including several of the Eberlin reaction type (M. N. Eberlin and R. G. Cooks, Org. Mass Spectrom., 1993, 28, 679–687) as well as novel gas-phase Meerwein reactions. The reactions include (1) Eberlin transacetalization of the benzoyl, 2,2-dimethyloximinium, and 2,2-dimethylthiooximinium cations with 2,2-dimethyl-1,3-dioxolane to form 2-phenyl-1,3-dioxolanylium cations, 2,2-dimethylamine-1,3-dioxolanylium cations and the 2,2-dimethylamin-1,3-oxathiolanylium cations, respectively; (2) Eberlin reaction of the phosphonium ion CH3P(O)OCH3+, formed from the chemical warfare agent simulant dimethyl methylphosphonate (DMMP), with 1,4-dioxane to yield the 1,3,2-dioxaphospholanium ion, a new characteristic reaction for phosphate ester detection; (3) the novel Meerwein reaction of the ion CH3P(O)OCH3+ with propylene sulfide forming 1,3,2-oxathionylphospholanium ion; (4) the Meerwein reaction of the benzoyl cation with propylene oxide and propylene sulfide to form 4-methyl-2-phenyl-1,3-dioxolane and its thio analog, respectively; (5) ketalization of the benzoyl cation with ethylene glycol to form the 2-phenyl-1,3-dioxolanylium cation; (6) addition/NO2 elimination involving benzonitrile radical cation in reaction with nitrobenzene to form an arylated nitrile, a diagnostic reaction for explosives detection and (7) simple methanol addition to the C7H7+ ion, formed by NO2 loss from the molecular ion of p-nitrotoluene to form an intact adduct. Evidence is provided that these reactions occur to give the products described and their potential analytical utility is discussed.
Co-reporter:Lianming Wu, Karel Lemr, Tenna Aggerholm, R.Graham Cooks
Journal of the American Society for Mass Spectrometry 2003 Volume 14(Issue 2) pp:152-160
Publication Date(Web):February 2003
DOI:10.1016/S1044-0305(02)00868-1
The kinetic method is applied to differentiate and quantify mixtures of isomeric tripeptides based on the competitive dissociations of divalent metal ion-bound clusters in an ion trap mass spectrometer. This methodology is extended further to determine compositions of ternary mixtures of the isomers Gly-Gly-Ala (GGA), Ala-Gly-Gly (AGG), and Gly-Ala-Gly (GAG). This procedure also allows to perform chiral quantification of a ternary mixture of optical isomers. The divalent metal ion CaII is particularly appropriate for isomeric distinction and quantification of the isobaric tripeptides Gly-Gly-Leu/Gly-Gly-Ile (GGL/GGI). Among the first-row transition metal ions, CuII yields remarkably effective isomeric differentiation for both the isobaric tripeptides, GGI/GGL using GAG as the reference ligand, and the positional isomers GAG/GGA using GGI as the reference ligand. This is probably due to agostic bonding: α-agostic bonding occurs between CuII and GAG and β-agostic bonding between CuII and GGI, each produces large but different steric effects on the stability of the CuII-bound dimeric clusters. These data form the basis for possible future quantitative analyses of mixtures of larger peptides such as are generated, for example, in combinatorial synthesis of peptides and peptide mimics.
Co-reporter:Hao Chen, Xubin Zheng, R.Graham Cooks
Journal of the American Society for Mass Spectrometry 2003 Volume 14(Issue 3) pp:182-188
Publication Date(Web):March 2003
DOI:10.1016/S1044-0305(02)00904-2
Phosphonium ions CH3P(O)OCH3+ (93 Th) and CH3OP(O)OCH3+ (109 Th) react with 1,4-dioxane to form unique cyclic ketalization products, 1,3,2-dioxaphospholanium ions. By contrast, a variety of other types of ions having multiple bonds, including the acylium ions CH3CO+ (43 Th), CH3OCO+ (59 Th), (CH3)2NCO+ (72 Th), and PhCO+ (105 Th), the iminium ion H2CNHC2H5+ (58 Th) and the carbosulfonium ion H2CSC2H5+ (75 Th) do not react with 1,4-dioxane under the same conditions. The characteristic ketalization reaction can also be observed when CH3P(OH)(OCH3)2+, viz. protonated dimethyl methylphosphonate (DMMP), collides with 1,4-dioxane, as a result of fragmentation to yield the reactive phosphonium ion CH3P(O)OCH3+ (93 Th). This novel ion/molecule reaction is highly selective to phosphonium ions and can be applied to identify DMMP selectively in the presence of ketone, ester, and amide compounds using a neutral gain MS/MS scan. This method of DMMP analysis can be applied to aqueous solutions using electrospray ionization; it shows a detection limit in the low ppb range and a linear response over the range 10 to 500 ppb.
Co-reporter:Hongyan Li, Yanan Peng, Wolfgang R Plass, R.Graham Cooks
International Journal of Mass Spectrometry 2003 Volume 222(1–3) pp:481-491
Publication Date(Web):1 January 2003
DOI:10.1016/S1387-3806(02)00959-4
Chemical mass shifts of nitro-aromatic compounds were measured in a custom-modified GCQ ion trap instrument. The average normalized chemical mass shift of 0.91 (Δm/m, %) for the molecular ions of 24 nitro-aromatic compounds examined is much larger than the average value of 0.41 (Δm/m, %) measured for a group of aromatic compounds without the nitro substituent. The larger chemical mass shifts associated with the nitro group could serve as a diagnostic for identifying this class of compounds in mixtures and a simple method of implementing this test is described. Samples were examined at two different ac resonance ejection frequencies, one corresponding to the non-linear resonance frequency at qz=0.80 where chemical mass shifts are small for all compounds, the other corresponding to qz=0.75 where chemical mass shifts are in full operation. The difference in apparent mass under these two conditions is used as an easily measured criterion for recognizing compounds that satisfy the mass shift criterion for nitro-aromatic compounds.
Co-reporter:Zoltan Takats Dr.;Sergio C. Nanita
Angewandte Chemie 2003 Volume 115(Issue 30) pp:
Publication Date(Web):30 JUL 2003
DOI:10.1002/ange.200390570
Co-reporter:Zoltan Takats Dr.;Sergio C. Nanita
Angewandte Chemie 2003 Volume 115(Issue 30) pp:
Publication Date(Web):30 JUL 2003
DOI:10.1002/ange.200351210

Ursprung der Homochiralität? Serin geht enantioselektive Reaktionen ein, die bedeutsam für den Ursprung von homochiralem Leben sein könnten. Chiralitätsaustausch zwischen Serin, Glyceraldehyd und Glucose führt bevorzugt zu denjenigen Enantiomeren (L-Serin, D-Zucker), die heute auch in lebenden Organismen gefunden werden (siehe Bild).

Co-reporter:Zoltan Takats Dr.;Sergio C. Nanita
Angewandte Chemie International Edition 2003 Volume 42(Issue 30) pp:
Publication Date(Web):30 JUL 2003
DOI:10.1002/anie.200390541
Co-reporter:Zoltan Takats Dr.;Sergio C. Nanita
Angewandte Chemie International Edition 2003 Volume 42(Issue 30) pp:
Publication Date(Web):30 JUL 2003
DOI:10.1002/anie.200351210

The earliest molecule of life? Chirally selective reactions relevant to the origin of homochiral life are undergone by serine. Chiral exchange between serine, glyceraldehyde, and glucose occurs, favoring the enantiomers (L-serine, D-sugars) present in modern living systems (see picture).

Co-reporter:Daniella V. Augusti, Rodinei Augusti, Fernando Carazza and R. Graham Cooks  
Chemical Communications 2002 (Issue 19) pp:2242-2243
Publication Date(Web):09 Sep 2002
DOI:10.1039/B204421H
Rapid and simple chiral analysis of thalidomide solutions is demonstrated by using electrospray ionization tandem mass spectrometry and analysis of cluster ion dissociation by the kinetic method. Average deviations of 1% between the actual and experimental enantiomeric compositions are observed.
Co-reporter:Yanan Peng, Wolfgang R. Plass, R.Graham Cooks
Journal of the American Society for Mass Spectrometry 2002 Volume 13(Issue 6) pp:623-629
Publication Date(Web):June 2002
DOI:10.1016/S1044-0305(02)00348-3
Relationships between chemical mass shifts and physiochemical properties of ions are sought by examining substituted acetophenones, benzophenones, and pyridines in a modified ion trap mass spectrometer. Systematic changes in chemical mass shift occur with changes in substituent in the acetophenones and the benzophenones. Brown’s σ+ constant, which is a measure of electronic effects of substituents in reactions that involve positive charge development, is shown to correlate linearly with chemical mass shifts in para-substituted acetophenones and benzophenones. Brown’s σ+ constant also correlates with the ease of dissociation of the ions via a correlation with ionization energy. It is suggested that ease of dissociation is the underlying factor in determining chemical mass shifts. The experimental results also suggest that dissociative collisions between ions and buffer gas make a much greater contribution to chemical mass shifts than do elastic collisions.
Co-reporter:Kim J. Koch;Fabio C. Gozzo;Sergio C. Nanita;Z. Takats;Marcos N. Eberlin
Angewandte Chemie International Edition 2002 Volume 41(Issue 10) pp:
Publication Date(Web):15 MAY 2002
DOI:10.1002/1521-3773(20020517)41:10<1721::AID-ANIE1721>3.0.CO;2-5

Chiral exchange: Substitution of cysteine for serine in the homochiral serine octamer (see calculated structure) occurs in a chirally dependent fashion and may represent an example of transfer of chirality between primitive biological molecules. The findings are supported by HF/6-31G calculations.

Co-reporter:Kim J. Koch;Fabio C. Gozzo;Sergio C. Nanita;Z. Takats;Marcos N. Eberlin
Angewandte Chemie 2002 Volume 114(Issue 10) pp:
Publication Date(Web):15 MAY 2002
DOI:10.1002/1521-3757(20020517)114:10<1797::AID-ANGE1797>3.0.CO;2-V

Chiraler Austausch: Im homochiralen Serin-Octamer (siehe die berechnete Struktur) lassen sich zwei Serine gegen zwei Cysteine gleicher Chiralität austauschen. Mit dem spezifischen Einbau des „richtigen“ Enantiomers ist ein Beispiel für den Chiralitätstransfer zwischen einfachen biologischen Molekülen gegeben. Ab-initio-Rechnungen unterstützen diesen Befund.

Co-reporter:Leah S. Riter, Zoltán Takáts and R. Graham Cooks  
Analyst 2001 vol. 126(Issue 11) pp:1980-1984
Publication Date(Web):23 Oct 2001
DOI:10.1039/B105857F
Construction, optimization, and testing of a novel single-sided configuration for a semi-permeable [poly(dimethylsiloxane); PDMS] membrane introduction system for mass spectrometry is described. On-line detection of semi-volatile organic compounds of environmental interest is shown, including lindane (a pesticide), hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) (an explosive), butylated hydroxytoluene (BHT) (an antioxidant), 1,2-dichlorobenzene, dimethylmethyl phosphonate (DMMP) (a chemical warfare agent simulant) and naphthalene. The technique has limits of detection in the sub-ppb range, with rise times of 4 to 7 s and fall times of 12 to 36 s and a response that is linear over 4 orders of magnitude (from 0.1 ppb to 1000 ppb for DMMP). The cycle time, from crude air sampling to acquisition of results, is approximately 1 min. No sample preparation is necessary.
Co-reporter:W.Andy Tao, Lianming Wu, R.Graham Cooks
Journal of the American Society for Mass Spectrometry 2001 Volume 12(Issue 5) pp:490-496
Publication Date(Web):May 2001
DOI:10.1016/S1044-0305(01)00237-9
Application of the kinetic method based on the dissociation of transition metal centered cluster ions is extended from chiral analysis (Tao, W. A.; Zhang, D.; Nikolaev, E. N.; Cooks, R. G. J. Am. Chem. Soc.2000,122, 10598) to quantitative analysis of isomeric mixtures, including those with Leu/Ile substitutions. Copper(II)-bound complexes of pairs of peptide isomers are generated by electrospray ionization mass spectrometry and the trimeric complex [CuII(ref)2(A) − H]+ (analyte A, a mixture of isomeric peptides; reference compound ref, usually a peptide) is caused to undergo collisional dissociation. Competitive loss of the neutral reference compound or the neutral analyte yields two ionic products and the ratio of rates of the two competitive dissociations, viz. the product ion branching ratio R is shown to depend strongly on the regiochemistry of the analyte in the precursor [CuII(A)(ref)2 − H]+ complex ion. Calibration curves are constructed by relating the branching ratio measured by the kinetic method, to the isomeric composition of the mixture to allow rapid quantitative isomer analysis.
Co-reporter:Xubin Zheng, W.Andy Tao, R.Graham Cooks
Journal of the American Society for Mass Spectrometry 2001 Volume 12(Issue 8) pp:948-955
Publication Date(Web):August 2001
DOI:10.1016/S1044-0305(01)00278-1
We report gas phase ion/molecule reactions between dialkoxyborinium cations (RO−B+−OR) and small organic amides, such as N,N-dimethylformamide and N,N-diethylpropionamide. Besides direct addition at boron, the results show efficient SN2 methyl transfer from the borinium ion to the amide. Isotopic labeling and collision-induced dissociation (CID) of the methyl transfer products demonstrate O-methylation of the amide. Methyl substitution at the α-carbon of the amide affects the degree of alkylation and adduct formation. Direct proton abstraction via β-elimination is a major competitive reaction for substituents other than methyl. Ab initio calculations at the B3LYP/6-31G(d) level indicate that SN2 transmethylation is highly exothermic with O-methylation favored over N-methylation by 14.8 kcal/mol.
Co-reporter:Duxi Zhang, W.A. Tao, R.Graham Cooks
International Journal of Mass Spectrometry 2001 Volume 204(1–3) pp:159-169
Publication Date(Web):6 February 2001
DOI:10.1016/S1387-3806(00)00330-4
Mass-selected trimeric cluster ions, [NiII(A)(ref∗)2−H]+, where A designates the analyte amino acid and ref∗ designates the chiral reference amino acid, undergo competitive collision-induced dissociation to yield two dimeric clusters with a branching ratio dictated by the stereochemistry of both the analyte and the reference. This branching ratio (R) is related, using the kinetic method, to an enthalpic term, ΔNiIIBDE, the difference between the formation enthalpies of the two dimeric clusters. Chiral resolution of d- and l-amino acids is directly related to the relative stabilities of the two diastereomeric clusters formed by the dissociation of the Ni(II)-bound trimeric clusters. The dimeric product ions differ in enthalpy by only a few kilojoules per mole, but chiral recognition is achieved for all 19 naturally occurring chiral amino acids, using appropriate reference amino acids. Because there is evidence that the dissociating trimeric clusters may exist in different isomeric forms, the proportion of analyte versus reference amino acids in the mixture was examined to study the effect of this ratio on the success of chiral recognition. The effect was found to be negligible. This suggests that there is an equilibrium between these isomeric clusters, which is governed by thermochemical properties rather than the relative concentrations of the constituent amino acids. A linear correlation was observed between ln(R) and enantiomeric compositions of the analyte as expected from the kinetic method treatment, and the direct measurement of optical purity to within 3% enantiomeric excess was demonstrated. With this new chiral recognition technique, qualitative and quantitative chiral analysis of amino acids is achieved.
Co-reporter:W. Andy Tao
Angewandte Chemie 2001 Volume 113(Issue 4) pp:
Publication Date(Web):15 FEB 2001
DOI:10.1002/1521-3757(20010216)113:4<779::AID-ANGE7790>3.0.CO;2-D
Co-reporter:W. Andy Tao, Lianming Wu and R. Graham Cooks  
Chemical Communications 2000 (Issue 20) pp:2023-2024
Publication Date(Web):28 Sep 2000
DOI:10.1039/B006277O
Direct chirality measurement of tartaric and other α-hydroxy acids at very low enantiomeric excess (ee) using a fast new mass spectrometric method.
Co-reporter:Leah S Riter, David F Fraley, R.Graham Cooks
Journal of the American Society for Mass Spectrometry 2000 Volume 11(Issue 1) pp:33-39
Publication Date(Web):January 2000
DOI:10.1016/S1044-0305(99)00114-2
Substituted nitrobenzenes react with substituted benzonitrile radical cations in an ion trap mass spectrometer by a novel ion/molecule reaction involving NO2 elimination. Formation of an arylated nitrile, Ar1+NCAr2 (where Ar1, Ar2 = aryl), is indicated by collision induced dissociation and comparison with the behavior of the authentic ion. Ab initio calculations (MP2/6-31G∗//HF/6-31G∗) show the reaction of the unsubstituted compounds (Ar1, Ar2 = phenyl) to be exothermic by 48 kcal/mol, consistent with the experimental observation that the reaction rate decreases as the collision energy is increased. Electron withdrawing and donating substituents on either the ionic or the neutral reagent have little effect on the relative amount of product observed, pointing to a radical mechanism. Related denitration reactions were found to occur, between nitrobenzene and its radical cation and between phenylisonitrile and ionized nitrobenzene. These reactions are suggested to yield Ar1+N(O)OAr2 and Ar2+ NCAr1, respectively. The denitration reaction was applied to trinitrotoluene (TNT) as a possible diagnostic reaction for the presence of nitroaromatic explosives.
Co-reporter:Duxi Zhang, R.Graham Cooks
International Journal of Mass Spectrometry 2000 Volumes 195–196() pp:667-684
Publication Date(Web):21 January 2000
DOI:10.1016/S1387-3806(99)00184-0
Doubly charged sodium chloride cluster ions [(NaCl)m(Na)2]2+ with m = 11–62, were produced by electrospray ionization and examined by tandem mass spectrometry in a quadrupole ion trap. Variations in the ion intensity with cluster size indicate the existence of magic numbers at m = 11, 12, 17, 20, 21, 26, 30, 34, 36, 44, 54, and 61. The magic number clusters were studied by collision-induced dissociation (CID). The largest clusters (m > 35) fragment mainly by neutral losses. Cluster ions containing 19–35 NaCl molecules are prone to fission with charge separation to form a singly charged magic number cluster ion (a regular crystallite comprised of a × b × c ions, where a, b, and c are small odd integers) along with other lower abundance singly charged clusters. Small doubly charged clusters (m < 19) could not be isolated for study by tandem mass spectrometry unless an unusually large isolation window (10–30 mass/charge units) was used. Structures of three types are proposed to account for the dissociation behavior of the magic number clusters: (1) combination blocks, where a block is a singly charged magic number cluster a × b × c, including the special case of a perfect sheet (a × b × 1), (2) merged blocks, and (3) regular crystallites with single-point defects (a × b × c − 1, where a, b, and c are small odd integers). Electrospray ionization (ESI) proves to be a good way to generate salt clusters in the gas phase and ion trap tandem mass spectrometry is well suited to their characterization.
Co-reporter:Feng Wang;Shuguang Ma;W. Andy Tao
Angewandte Chemie 1999 Volume 111(Issue 3) pp:
Publication Date(Web):12 MAR 1999
DOI:10.1002/(SICI)1521-3757(19990201)111:3<399::AID-ANGE399>3.0.CO;2-R

Effizienz und strukturelle Spezifität kennzeichnen die Reaktion der Phosphonium-Ionen 1 mit cyclischen Acetalen und Ketalen zu den 1,3,2-Dioxaphospholanium-Ionen 2 [Gl. (1)]. Mögliche Anwendungsbereiche für diese Reaktion sind die Identifizierung in Spuren vorhandener Organophosphorsäureester und die Entwicklung neuartiger Carbonyl-Entschützungsreagentien. R=OCH3, CH3; R1=H, CH3; R2=CH3, C6H5; R3=H, CH3.

Co-reporter:Feng Wang;Shuguang Ma;W. Andy Tao
Angewandte Chemie International Edition 1999 Volume 38(Issue 3) pp:
Publication Date(Web):3 FEB 1999
DOI:10.1002/(SICI)1521-3773(19990201)38:3<386::AID-ANIE386>3.0.CO;2-5

Efficiency and structural specificity earmark the reaction of phosphonium ions 1 with cyclic acetals and ketals to yield 1,3,2-dioxaphospholanium ions 2 [Eq. (1)]. Potential applications of this reaction are in monitoring trace levels of organophosphorus esters and in developing novel carbonyl deprotection agents. R=OCH3, CH3; R1=H, CH3; R2=CH3, C6H5; R3=H, CH3.

Co-reporter:J.S. Patrick, T. Pradeep, H. Luo, S. Ma, R.G. Cooks
Journal of the American Society for Mass Spectrometry 1998 Volume 9(Issue 11) pp:1158-1167
Publication Date(Web):November 1998
DOI:10.1016/S1044-0305(98)00086-5
Gas-phase reactions of W-, Si-, P-, Br-, and I-containing ions with the target molecule perfluorohexane at low collision energies (<15 eV) parallel known ion/surface reactions of the same projectile ions at fluorinated self-assembled monolayer surfaces. Charge exchange, dissociative charge exchange, and fluorine atom abstraction are observed and the majority of the projectile ions also undergo reactive charge exchange to produce specific fluorocarbon fragment ions of the target molecule in distinctive relative abundances. Abstraction of up to five fluorine atoms is observed upon collision of W+ with gaseous perfluorohexane, while similar experiments with CI+, SiCl+, and PCl+· show abstraction of one or two fluorine atoms. Other projectiles, including Si+·, PCl2+, Br+, CBr+, and I+, abstract only a single fluorine atom. These patterns of fluorine atom abstraction are similar to those observed in ion/surface collisions. Also paralleling the ion/surface reactions, halogen exchange (Cl-for-F) reactions occur between the Cl-containing projectile ions and perfluorohexane to produce C6F12Cl+, a product of chemical modification of the target. Collisions of PCl+· and PCl2+ also result in production of C6F12+·, indicating that the corresponding surface modification reaction involving molecular defluorination should be sought. Implications for previously proposed mechanisms, new ion/surface reactions, and for the use of gas-phase studies to guide investigations of the ion/surface reactions are discussed.
Co-reporter:Jeff W. Denault, Guodong Chen, R.Graham Cooks
Journal of the American Society for Mass Spectrometry 1998 Volume 9(Issue 11) pp:1141-1145
Publication Date(Web):November 1998
DOI:10.1016/S1044-0305(98)00092-0
The kinetic method is used to determine the electron affinity (EA) of 1,3,5,7-cyclooctatetraene (COT), a compound that undergoes a significant structural change upon electron attachment. Collision-induced dissociation of anionic clusters of COT with a set of reference compounds (Ref), [COT · Ref]−·, at various collision energies, allowed deconvolution of the relative enthalpies and entropies of the competitive reactions. The adiabatic EA of COT is determined to be 0.58 ± 0.10 eV, in good agreement with the value, 0.58 ± 0.04 eV, of Wentworth and Ristau (J. Phys. Chem. 1969, 73, 2126) determined by thermal electron detachment as well as the more recent value, 0.55 ± 0.02 eV, of Kato et al. (J. Am. Chem. Soc. 1997, 119, 7863) determined by equilibrium electron transfer with molecular oxygen. A large entropy difference, 25.6 ± 10.0 e.u. (J mol−1 K−1), is observed between the two dissociation channels. This entropy difference corresponds to a negative 14.7 ± 13.0 e.u. change for the dissociation of the dimer to give COT−· and the neutral reference compound and a positive 10.9 ± 8.4 e.u. entropy change for the dissociation of the dimer to give Ref−· and neutral COT.
Co-reporter:Fatkhulla K. Tadjimukhamedov, Ayanna U. Jackson, Erkinjon G. Nazarov, Zheng Ouyang, R. Graham Cooks
Journal of the American Society for Mass Spectrometry (September 2010) Volume 21(Issue 9) pp:1477-1481
Publication Date(Web):1 September 2010
DOI:10.1016/j.jasms.2010.06.001
A planar differential mobility spectrometer (DMS) was coupled to a Mini 10 handheld rectilinear ion trap (RIT) mass spectrometer (MS) (total weight 10 kg), and the performance of the instrument was evaluated using illicit drug analysis. Coupling of DMS (which requires a continuous flow of drift gas) with a miniature MS (which operates best using sample introduction via a discontinuous atmospheric pressure interface, DAPI), was achieved with auxiliary pumping using a 5 L/min miniature diaphragm sample pump placed between the two devices. On-line ion mobility filtering showed to be advantageous in reducing the background chemical noise in the analysis of the psychotropic drug diazepam in urine using nanoelectrospray ionization. The combination of a miniature mass spectrometer with simple and rapid gas-phase ion separation by DMS allowed the characteristic fragmentation pattern of diazepam to be distinguished in a simple urine extract at lower limits of detection (50 ng/mL) than that achieved without DMS (200 ng/mL). The additional separation power of DMS facilitated the identification of two drugs of similar molecular weight, morphine (average MW = 285.34) and diazepam (average MW = 284.70), using a miniature mass spectrometer capable of unit resolution. The similarity in the proton affinities of these two compounds resulted in some cross-interference in the MS data due to facile ionization of the neutral form of the compound even when the ionic form had been separated by DMS.On-line differential ion mobility (DMS) separation enhances analysis of drugs in urine using Mini MS.Download high-res image (111KB)Download full-size image
Co-reporter:Livia S. Eberlin, Christina R. Ferreira, Allison L. Dill, Demian R. Ifa, R. Graham Cooks
Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids (November 2011) Volume 1811(Issue 11) pp:
Publication Date(Web):November 2011
DOI:10.1016/j.bbalip.2011.05.006
Desorption electrospray ionization mass spectrometry (DESI-MS) imaging of biological samples allows untargeted analysis and structural characterization of lipids ionized from the near-surface region of a sample under ambient conditions. DESI is a powerful and sensitive MS ionization method for 2D and 3D imaging of lipids from direct and unmodified complex biological samples. This review describes the strengths and limitations of DESI-MS for lipid characterization and imaging together with the technical workflow and a survey of applications. Included are discussions of lipid mapping and biomarker discovery as well as a perspective on the future of DESI imaging.Research highlights► DESI-MS is a powerful and sensitive ambient MS ionization method. ► 2D and 3D imaging of lipids from untreated biological samples is achieved by DESI-MS under ambient conditions. ► DESI-MS has strengths and limitations for lipid characterization and imaging. ► DESI-MS technical workflow and a survey of applications are described. ► Discussion on lipid mapping and biomarker discovery and a perspective on the future of DESI imaging are included.
Co-reporter:Sergio C. Nanita, Ewa Sokol, R. Graham Cooks
Journal of the American Society for Mass Spectrometry (May 2007) Volume 18(Issue 5) pp:856-868
Publication Date(Web):1 May 2007
DOI:10.1016/j.jasms.2007.01.003
Serine solutions containing salts of alkali metals yield magic number clusters of the type (Ser4+C)+, (Ser8+C)+, (Ser12+C)+, and (Ser17+2C)+2 (where C = Li+, Na+, K+, Rb+, or Cs+), in relative abundances which are strongly dependent on the cation size. Strong selectivity for homochirality is involved in the formation of serine tetramers cationized by K+, Rb+, and Cs+. This is also the case for the octamers cationized by the smaller alkalis but there is a strong preference for heterochirality in the octamers cationized by the larger alkali cations. Tandem mass spectrometry shows that the octamers and dodecamers cationized by K+, Rb+, and Cs+ dissociate mainly by the loss of Ser4 units, suggesting that the neutral tetramers are the stable building blocks of the observed larger aggregates, (Ser8+C)+ and (Ser12+C)+. Remarkably, although the Ser4 units are formed with a strong preference for homochirality, they aggregate further regardless of their handedness and, therefore, with a preference for the nominally racemic 4D:4L structure and an overall strong heterochiral preference. The octamers cationized by K+, Rb+, or Cs+ therefore represent a new type of cluster ion that is homochiral in its internal subunits, which then assemble in a random fashion to form octamers. We tentatively interpret the homochirality of these tetramers as a consequence of assembly of the serine molecules around a central metal ion. The data provide additional evidence that the neutral serine octamer is homochiral and is readily cationized by smaller ions.
Co-reporter:Marcela Nefliu, Jonell N. Smith, Andre Venter, R. Graham Cooks
Journal of the American Society for Mass Spectrometry (March 2008) Volume 19(Issue 3) pp:420-427
Publication Date(Web):1 March 2008
DOI:10.1016/j.jasms.2007.11.019
The internal energy distributions of typical ions generated by desorption electrospray ionization (DESI) were measured using the “survival yield” method, and compared with corresponding data for electrospray ionization (ESI) and electrosonic spray ionization (ESSI). The results show that the three ionization methods produce populations of ions having internal energy distributions of similar shapes and mean values (1.7–1.9 eV) suggesting similar phenomena, at least in the later stages of the process leading from solvated droplets to gas-phase ions. These data on energetics are consistent with the view that DESI involves “droplet pick-up” (liquid-liquid extraction) followed by ESI-like desolvation and gas-phase ion formation. The effects of various experimental parameters on the degree of fragmentation of p-methoxy-benzylpyridinium ions were compared between DESI and ESSI. The results show similar trends in the survival yields as a function of the nebulizing gas pressure, solvent flow rate, and distance from the sprayer tip to the MS inlet. These observations are consistent with the mechanism noted above and they also enable the user to exercise control over the energetics of the DESI ionization process, through manipulation of external and internal ion source parameters.
Co-reporter:Liang Gao, Guangtao Li, R. Graham Cooks
Journal of the American Society for Mass Spectrometry (February 2010) Volume 21(Issue 2) pp:209-214
Publication Date(Web):1 February 2010
DOI:10.1016/j.jasms.2009.10.005
Axial collision induced dissociation (CID) and high-pressure resonance CID were implemented and compared with normal low-pressure resonance CID in a miniature ion trap mass spectrometer to obtain more complete fragmentation spectra. Axial CID was realized simply by applying a potential to the discontinuous atmospheric pressure interface (DAPI) capillary without performing parent ion isolation before dissociation. High-pressure resonance CID employed a double-introduction pulse scan function, by means of which precursor ions isolated at low-pressure (<10−3 torr) were dissociated at high-pressure (0.1 torr–1 torr) with higher excitation energy, so that tandem MS of isolated precursor ions was achieved and extensive fragmentation was obtained. A simple peptide (Leu-enkephalin) and dye molecule (rhodamine B) ionized by ESI were used to investigate both methods and compare them with normal low-pressure resonance CID.Two new methods and one old method of CID in a miniature ion trap are compared.Download high-res image (159KB)Download full-size image
Co-reporter:Chunping Wu, Kuangnan Qian, Marcela Nefliu, R. Graham Cooks
Journal of the American Society for Mass Spectrometry (February 2010) Volume 21(Issue 2) pp:261-267
Publication Date(Web):1 February 2010
DOI:10.1016/j.jasms.2009.10.006
Saturated nonfunctionalized hydrocarbons can be oxidized in situ by initiating an electrical discharge during desorption electrospray ionization (DESI) to generate the corresponding alchohols and ketones. This form of reactive DESI experiment can be utilized as an in situ derivatization method for rapid and direct analysis of alkanes at atmospheric pressure without sample preparation. Betaine aldehyde was incorporated into the DESI spray solution to improve the sensitivity of detecting the long-chain alcohol oxidation products. The limit of detection for alkanes (C15H32 to C30H62) from pure samples is ∼20 ng. Multiple oxidations and dehydrogenations occurred during the DESI discharge, but no hydrocarbon fragmentation was observed, even for highly branched squalane. Using exact mass measurements, the technique was successfully implemented for analysis of petroleum distillates containing saturated hydrocarbons.Deliberately generated electrical discharges during DESI allow rapid and direct analysis of petroleum distillates in the open air through in situ oxidation of non-functionalized hydrocarbons.Download high-res image (173KB)Download full-size image
Co-reporter:Nicholas E. Manicke, Thomas Kistler, Demian R. Ifa, R. Graham Cooks, Zheng Ouyang
Journal of the American Society for Mass Spectrometry (February 2009) Volume 20(Issue 2) pp:321-325
Publication Date(Web):1 February 2009
DOI:10.1016/j.jasms.2008.10.011
A newly developed high-throughput desorption electrospray ionization (DESI) source was characterized in terms of its performance in quantitative analysis. A 96-sample array, containing pharmaceuticals in various matrices, was analyzed in a single run with a total analysis time of 3 min. These solution-phase samples were examined from a hydrophobic PTFE ink printed on glass. The quantitative accuracy, precision, and limit of detection (LOD) were characterized. Chemical background-free samples of propranolol (PRN) with PRN-d7 as internal standard (IS) and carbamazepine (CBZ) with CBZ-d10 as IS were examined. So were two other sample sets consisting of PRN/PRN-d7 at varying concentration in a biological milieu of 10% urine or porcine brain total lipid extract, total lipid concentration 250 ng/μL. The background-free samples, examined in a total analysis time of 1.5 s/sample, showed good quantitative accuracy and precision, with a relative error (RE) and relative standard deviation (RSD) generally less than 3% and 5%, respectively. The samples in urine and the lipid extract required a longer analysis time (2.5 s/sample) and showed RSD values of around 10% for the samples in urine and 4% for the lipid extract samples and RE values of less than 3% for both sets. The LOD for PRN and CBZ when analyzed without chemical background was 10 and 30 fmol, respectively. The LOD of PRN increased to 400 fmol analyzed in 10% urine, and 200 fmol when analyzed in the brain lipid extract.A 96-sample plate is analyzed with quantitative accuracy and precision in ca. 3 min by desorption electrospray ionization mass spectrometry (DESI-MS).Download high-res image (154KB)Download full-size image
Co-reporter:Abraham Badu-Tawiah, R. Graham Cooks
Journal of the American Society for Mass Spectrometry (August 2010) Volume 21(Issue 8) pp:1423-1431
Publication Date(Web):1 August 2010
DOI:10.1016/j.jasms.2010.04.001
Solvent optimization is an important procedure in desorption electrospray ionization (DESI) and in this study the effects of solvent surface tension are explored. Data are presented for methanol/water/surfactant solvent systems, which show increases in ion signals of more than an order of magnitude when low concentrations of surfactants are added to the standard methanol/water (1:1) spray solvent. Examples of analytes tested include food chemicals, peptides, pharmaceuticals, and drugs of abuse. The improvement in ion intensity is mainly attributed to the effect of surface tension in producing smaller spray droplets, which are shown to cover a larger surface area. Surfactant-containing spray solutions allowed extension of DESI-MS analysis to previously intractable analytes like melamine and highly hydrophobic compounds like the sudan dyes.Surfactants modify solvent surface tension extending DESI analysis to both hydrophobic and hydrophilic compounds. Signal intensity increases because the smaller droplets cover a larger sample area.Download high-res image (136KB)Download full-size image
Co-reporter:Abraham Badu-Tawiah, Celine Bland, Dahlia I. Campbell, R. Graham Cooks
Journal of the American Society for Mass Spectrometry (April 2010) Volume 21(Issue 4) pp:572-579
Publication Date(Web):1 April 2010
DOI:10.1016/j.jasms.2009.12.012
The use of non-aqueous solvents in desorption electrospray ionization mass spectrometry (DESI-MS) is explored by analyzing a set of 43 compounds using binary mixtures of chloroform, tetrahydrofuran, and acetonitrile as the spray solvent. Comparisons of data obtained from chloroform/tetrahydrofuran (1:1) and chloroform/acetonitrile (1:1) spray solvents with the standard aqueous-based spray solvent (methanol/water, 1:1) shows that the non-aqueous systems have practical value for DESI, especially in the analysis of hydrophobic compounds. Non-aqueous spray solvents were used to ionize thermometer molecules (benzyl pyridinium salts) and showed lower internal energies (softer DESI ionization compared with methanol/water, 1:1), a result that has parallels in known solvent effects in electrospray ionization and is explained by solvent effects on surface tension. Consideration of octanol/water partition coefficients (Kow) of the 43 analytes in the light of their DESI results reveals the importance of the solubility of analyte in the spray solvent in producing high quality mass spectra. This finding provides additional support for the droplet pick-up description of the DESI mechanism, which is based on analyte dissolution in the spray solvent, followed by splashing of subsequently arriving droplets in the liquid film to form microdroplets of dissolved analyte. DESI solvent optimization can be improved by the use of Kow of the analyte as an indication of the polarity of the most appropriate solvent system.Non-aqueous solvents extend DESI analysis to hydrophobic compounds and show that analyte solubility in spray solvent is important. Analyte Kow values may indicate the polarity of the appropriate solvent system.Download high-res image (79KB)Download full-size image
Co-reporter:Nicholas E. Manicke, Justin M. Wiseman, Demian R. Ifa, R. Graham Cooks
Journal of the American Society for Mass Spectrometry (April 2008) Volume 19(Issue 4) pp:531-543
Publication Date(Web):1 April 2008
DOI:10.1016/j.jasms.2007.12.003
Desorption electrospray ionization (DESI) mass spectrometry was evaluated for the characterization of glycerophospholipid standards, including glycerophosphocholine (GPCho), glycerophosphoglycerol (GPGro), glycerophosphoethanolamine (GPEtn), glycerophosphoserine (GPSer), glycerophosphoinositol (GPIns), cardiolipin (CL), and sphingolipid standards, including sulfatides (ST) and sphingomyelin (SM). Of specific interest were the effects of surface and solvent composition on signal stability and intensity, along with the ions observed in the full scan mode and the fragmentations seen upon collisional activation for each of the above classes. These experiments were performed without the addition of matrix compounds to the sample and were conducted in the free ambient environment at atmospheric pressure. The compounds GPSer, GPGro, GPIns, ST, and CL were best analyzed in the negative ion mode while PE was ionized efficiently in both positive and negative ion modes. SM and GPCho, which typically generate more abundant ions in the positive ion mode, could be analyzed in the negative ion mode by the addition of anionic reagents such as acetate to the spray solvent. Full scan DESI mass spectra and tandem (MS/MS) spectra for this representative set of physiological phospho/sphingolipids are presented. Similarities with other ionization methods in terms of fragmentation behavior were strong, although ambient ionization of untreated samples is only available with DESI. The effect of surface and solvent properties on signal intensity and stability were determined by depositing standard compounds on several different surfaces and analyzing with various proportions of methanol in the aqueous spray. Analysis was extended to complex mixtures of phospholipids and sphingolipids by examining the total lipid extract of porcine brain and by direct analysis of rat brain cryotome sections. These types of mixture analyses and molecular imaging studies are likely to represent major areas of application of DESI.
Co-reporter:Dalton T. Snyder, Wen-Ping Peng, R. Graham Cooks
Chemical Physics Letters (16 January 2017) Volume 668() pp:
Publication Date(Web):16 January 2017
DOI:10.1016/j.cplett.2016.11.011
•Principles of operation of the quadrupole ion trap are reviewed.•Linear and nonlinear resonances are emphasized.•Effect of electric field nonlinearity is addressed.•Methods using ion frequencies for mass-selective operations are presented.The quadrupole ion trap is widely used in the chemical physics community for making measurements on dynamical systems, both intramolecular (e.g. ion fragmentation reactions) and intermolecular (e.g. ion/molecule reactions). In this review, we discuss linear and nonlinear resonances in quadrupole ion traps, an understanding of which is critical for operation of these devices and interpretation of the data which they provide. The effect of quadrupole field nonlinearity is addressed, with important implications for promoting fragmentation and achieving unique methods of mass scanning. Methods that depend on ion resonances (i.e. matching an external perturbation with an ion’s induced frequency of motion) are discussed, including ion isolation, ion activation, and ion ejection.
Co-reporter:
Analytical Methods (2009-Present) 2012 - vol. 4(Issue 7) pp:
Publication Date(Web):
DOI:10.1039/C2AY25222H
Leaf spray, a rapid and simple ambient ionization method for mass spectrometry is shown to allow identification of a number of typical pesticides (acetamiprid, diphenylamine, imazalil, linuron, thiabendazole) directly in the peel and pulp of a variety of different fruits and vegetables (apple, pear, lemon, orange, carrot, cucumber, eggplant, potato). These identifications were confirmed by tandem mass spectrometry. Attempts were made to quantify the amount of pesticide using MS/MS data from calibration curves created with external standards. Calibration samples were made using samples created by adding pesticide standards to organic fruit or vegetable. Typical experiments take approximately 100 seconds to perform; limits of detection are within the levels specified for residue analysis by the EU. Linear dynamic ranges of three orders of magnitude and precisions of better than 15% are obtained.
Co-reporter:Guangming Huang, Zheng Ouyang and R. Graham Cooks
Chemical Communications 2009(Issue 5) pp:NaN558-558
Publication Date(Web):2008/12/01
DOI:10.1039/B818059H
Ambient ionization using a low-temperature plasma (LTP) probe combined with tandem mass spectrometry (MS/MS) allows detection and quantitation of melamine in milk powder, whole milk and other products at levels down to low ppb in analysis times of a few tens of seconds.
Co-reporter:Allison L. Dill, Livia S. Eberlin, Demian R. Ifa and R. Graham Cooks
Chemical Communications 2011 - vol. 47(Issue 10) pp:NaN2746-2746
Publication Date(Web):2010/12/16
DOI:10.1039/C0CC03518A
Imaging mass spectrometry (MS) allows a remarkable range of measurements including diagnosis of disease state of tissue based on detailed information on its chemical constituents, especially lipids and proteins. The recent emergence of ambient ionization allows imaging in the open environment without sample preparation. In this review, we briefly describe the history of imaging MS highlighting its main techniques and applications. We also demonstrate how the detailed molecular information obtained by imaging MS makes this technique suitable for a range of forensic and clinical applications with the potential to be successfully developed all the way to intra-surgical practice.
Co-reporter:Anyin Li, He Wang, Zheng Ouyang and R. Graham Cooks
Chemical Communications 2011 - vol. 47(Issue 10) pp:NaN2813-2813
Publication Date(Web):2011/02/01
DOI:10.1039/C0CC05513A
Non-polar solvents like hexane allow ionization of insoluble drugs, peptides, nucleotides and phospholipids as solids from paper. Ambient ionization is achieved simply by application of a high voltage to the wet paper. Transport and ionization mechanisms are discussed, including the possibility of field desorption from dendritic structures formed on the paper.
Co-reporter:Yishu Song, Nari Talaty, W. Andy Tao, Zhengzheng Pan and R. Graham Cooks
Chemical Communications 2007(Issue 1) pp:NaN63-63
Publication Date(Web):2006/11/27
DOI:10.1039/B615724F
Desorption electrospray ionization (DESI) allows the rapid acquisition of highly reproducible mass spectra from intact microorganisms under ambient conditions; application of principal component analysis to the data allows sub-species differentiation.
Co-reporter:Ryan M. Bain, Christopher J. Pulliam and R. Graham Cooks
Chemical Science (2010-Present) 2015 - vol. 6(Issue 1) pp:NaN401-401
Publication Date(Web):2014/09/09
DOI:10.1039/C4SC02436B
Complex chemical reactions can occur in electrosprayed droplets on the millisecond time scale. The Hantzsch synthesis of 1,4-dihydropyridines was studied in this way using on-line mass spectral analysis to optimize conditions and characterize the product mixture. Changing the distance between the nanospray source and the MS inlet allowed exploration of reaction progress as a function of droplet time-of-flight. Desolvation of the charged microdroplets is associated with transformation from starting material to intermediates and eventually to product as the distance is increased. Results of the on-line experiments require a termination step that discontinuously completes the desolvation process and allows the generated gaseous ions to be used to characterize the state of the system at a particular time. The intermediates seen correspond to those known to occur in the bulk solution-phase reaction. Off-line collection of the sprayed reaction mixture allowed the recovery of 250 mg h−1 of desired reaction product from a single sprayer, permitting characterization by NMR and other standard methods. A thin film version of the accelerated reaction is described and it could be controlled through the temperature of the collection surface.
Co-reporter:Richard H. Perry, Chunping Wu, Marcela Nefliu and R. Graham Cooks
Chemical Communications 2007(Issue 10) pp:NaN1073-1073
Publication Date(Web):2006/12/20
DOI:10.1039/B616196K
Sublimation of near-racemic samples of serine yields a sublimate which is highly enriched in the major enantiomer; this simple one-step process occurs under relatively mild conditions, and represents a possible mechanism for the chiral amplification step in homochirogenesis.
Co-reporter:Dina R. Justes, Nari Talaty, Ismael Cotte-Rodriguez and R. Graham Cooks
Chemical Communications 2007(Issue 21) pp:NaN2144-2144
Publication Date(Web):2007/04/27
DOI:10.1039/B703655H
Single nanogram amounts of the explosives TNT, RDX, HMX, PETN and their mixtures were detected and identified in a few seconds on the surface of human skin without any sample preparation by desorption electrospray ionization (DESI) using a spray solution of methanol–water doped with sodium chloride to form the chloride adducts with RDX, HMX, and PETN while TNT was examined as the radical anion and tandem mass spectrometry was used to confirm the identifications.
Co-reporter:Michael Wleklinski, Depanjan Sarkar, Adam Hollerbach, Thalappil Pradeep and R. Graham Cooks
Physical Chemistry Chemical Physics 2015 - vol. 17(Issue 28) pp:NaN18373-18373
Publication Date(Web):2015/06/15
DOI:10.1039/C5CP01538C
Electrospray ionization of metal salt solutions followed by ambient heating transforms the resulting salt clusters into new species, primarily naked ionic metal clusters. The experiment is done by passing the clusters through a heated coiled loop outside the mass spectrometer which releases the counter-anion while generating the anionic or cationic naked metal cluster. The nature of the anion in the starting salt determines the type of metal cluster observed. For example, silver acetate upon heating generates only positive silver clusters, Agn+, but silver fluoride generates both positive and negative silver clusters, Agn+/− (3 < n < 20). Both unheated and heated metal salt sprays yield ions with characteristic geometric and electronic magic numbers. There is also a strong odd/even effect in the cationic and anionic silver clusters. Thermochemical control is suggested as the basis for favored formation of the observed clusters, with anhydride elimination occurring from the acetates and fluorine elimination from the fluorides to give cationic and anionic clusters, respectively. Data on the intermediates observed as the temperature is ramped support this. The naked metal clusters react with gaseous reagents in the open air, including methyl substituted pyridines, hydrocarbons, common organic solvents, ozone, ethylene, and propylene. Argentation of hydrocarbons, including saturated hydrocarbons, is shown to occur and serves as a useful analytical ionization method. The new cluster formation methodology allows investigation of ligand–metal binding including in reactions of industrial importance, such as olefin epoxidation. These reactions provide insight into the physicochemical properties of silver cluster anions and cations. The potential use of the ion source in ion soft landing is demonstrated by reproducing the mass spectra of salts heated in air using a custom surface science instrument.
Co-reporter:Wen-Ping Peng, Grant E. Johnson, Ivy C. Fortmeyer, Peng Wang, Omar Hadjar, R. Graham Cooks and Julia Laskin
Physical Chemistry Chemical Physics 2011 - vol. 13(Issue 1) pp:NaN275-275
Publication Date(Web):2010/11/12
DOI:10.1039/C0CP01457E
Soft landing (SL) of mass-selected ions is used to transfer catalytically-active metal complexes complete with organic ligands from the gas phase onto an inert surface. This is part of an effort to prepare materials with defined active sites and thus achieve molecular design of surfaces in a highly controlled way. Solution-phase electrochemical studies have shown that VIVO(salen) reacts in the presence of acid to form VVO(salen)+ and the deoxygenated VIII(salen)+ complex—a key intermediate in the four electron reduction of O2 by vanadium–salen. In this work, the VVO(salen)+ and [NiII(salen) + H]+ complexes were generated by electrospray ionization and mass-selected before being deposited onto an inert fluorinated self-assembled monolayer (FSAM) surface on gold. A time dependence study after ion deposition showed loss of O from VVO(salen)+ forming VIII(salen)+ over a four-day period, indicating a slow interfacial reduction process. Similar results were obtained when other protonated molecules were co-deposited with VVO(salen)+ on the FSAM surface. In all these experiments oxidation of the VIII(salen)+ product occurred upon exposure to oxygen or to air. The cyclic regeneration of VVO(salen)+ upon exposure to molecular oxygen and its subsequent reduction to VIII(salen)+ in vacuum completes the catalytic cycle of O2reduction by the immobilized vanadium–salen species. Moreover, our results represent the first evidence of formation of reactive organometallic complexes on substrates in the absence of solvent. Remarkably, deoxygenation of the oxo-vanadium complex, previously observed only in highly acidic non-aqueous solvents, occurs on the surface in the UHV environment using an acid which is deposited into the inert monolayer. This acid can be a protonated metal complex, e.g. [NiII(salen) + H]+, or an organic acid such as protonated diaminododecane.
Co-reporter:Anthony B. Costa and R. Graham Cooks
Physical Chemistry Chemical Physics 2011 - vol. 13(Issue 3) pp:NaN885-885
Publication Date(Web):2010/11/22
DOI:10.1039/C0CP01402H
Serine “magic-number” clusters have attracted substantial experimental and theoretical interest since their discovery. Serine undergoes marked chiral enrichment upon sublimation, which has been associated with the homochiral selectivity of the octamer. This process has been implicated in one possible mechanism leading to the origin of biological homochirality. While the octamer is the best known of the serine clusters, here we focus on the tetramer, the smallest serine cluster known to exhibit homochiral preference. This choice is based on its greater simplicity and tractability with accessible computational resources. Basin-hopping molecular dynamics simulations coupled to density functional theory calculations yield a “structural landscape” for low-lying configurations on the potential energy surface. The full range of enantiomeric compositions and charge states is investigated. Global energy minimum serine tetramers consist of a cage structure bonded by zwitterionic terminal groups. The participation of the serine hydroxyl side chains in hydrogen bonds with adjacent monomers drives the homochiral selectivity of serine tetramers. The configuration of the hydrogen bonding network is strongly dependent on enantiomeric composition and charge state. Smaller cations are incorporated into the center of the tetramer cage and effectively disable all side chain hydrogen bonding, while larger cations appear not to incorporate into the tetramer cage and are stabilized outside only in the homochiral case. The current theoretical data requires the introduction of a kinetic barrier to complete the model, limiting rearrangement from the basic cage configuration in some cases, which is discussed and probed directly by doubly-nudged elastic band transition state searches. These calculations elucidate a large barrier for reorganization of the cage, completing the theoretical understanding of the tetramers.
Co-reporter:Kim J. Koch, Fabio C. Gozzo, Duxi Zhang, Marcos N. Eberlin and R. Graham Cooks
Chemical Communications 2001(Issue 18) pp:NaN1855-1855
Publication Date(Web):2001/09/04
DOI:10.1039/B107148N
Multiply charged serine metaclusters (composed of two or more homochiral octameric units) are generated by electrospray ionization, and their unique fused structures (hydrogen-bonded through the sticky ends of the drum-shaped octameric units) have been elucidated using tandem mass spectrometry experiments and molecular mechanics calculations.
Co-reporter:Bradley P. Loren, Michael Wleklinski, Andy Koswara, Kathryn Yammine, Yanyang Hu, Zoltan K. Nagy, David H. Thompson and R. Graham Cooks
Chemical Science (2010-Present) 2017 - vol. 8(Issue 6) pp:
Publication Date(Web):
DOI:10.1039/C7SC00905D
Co-reporter:Tiina J. Kauppila, Nari Talaty, Ayanna U. Jackson, Tapio Kotiaho, Risto Kostiainen and R. Graham Cooks
Chemical Communications 2008(Issue 23) pp:NaN2676-2676
Publication Date(Web):2008/05/08
DOI:10.1039/B804413A
Desorption electrospray ionization mass spectrometry (DESI-MS) is applied to the analysis of carbohydrates and steroids; the detection limits are significantly improved by the addition of low concentrations of salts to the spray solvent.
Co-reporter:Anthony B. Costa and R. Graham Cooks
Chemical Communications 2007(Issue 38) pp:NaN3917-3917
Publication Date(Web):2007/08/13
DOI:10.1039/B710511H
Computational fluid dynamics is used to model atmospheric transport and droplet–thin film (surface) collisions in desorption electrospray ionization; experimentally obtained droplet properties are replicated in the simulations while a “droplet pick-up” mechanism of analyte transport is confirmed.
Co-reporter:Marion Girod, Encarnacion Moyano, Dahlia I. Campbell and R. Graham Cooks
Chemical Science (2010-Present) 2011 - vol. 2(Issue 3) pp:NaN510-510
Publication Date(Web):2010/12/06
DOI:10.1039/C0SC00416B
Functional group derivatization reactions occur in the course of microdroplet/surface collisions in the ambient ionization process of desorption electrospray ionization (DESI). The unique environment in the microdroplet causes rate enhancements of as much as several orders of magnitude in typical bimolecular reactions that proceed through either cationic or anionic intermediates. The environment in the evaporating charged microdroplet differs from that of the bulk: (i) the pH of the solution moves towards the extremes, (ii) the concentrations of the reagents increase, (iii) the relative surface area increases and (iv) collision frequencies increase. The rates of acid-catalyzed reactions, such as the reaction of Girard T reagent with ketosteroids, increase with decreasing pH in positively-charged microdroplets compared to the bulk solution rates. Similarly, the increased pH in evaporating negatively-charged microdroplets contributes to an increase in the rates of base-catalyzed Michael reactions over those recorded under bulk solution conditions. The amount of product formed depends on the reaction time and the droplet size. Nanoelectrospray ionization generates larger droplets than the secondary droplets of DESI so it does not show significant product formation in the analysis period and can be used to analyze products of the DESI experiments. When secondary microdroplets (ca. 1 micron diameter) are generated either by spraying a homogeneous solution of both reagents against an inert surface (reactive DESI) or when a solution of Girard T reagent is sprayed against a solid surface bearing the ketosteroid significant amounts of product are generated. In the case of the Michael reaction with cinnamic acid an alternative dehydrogenated reaction product is formed under microdroplet conditions. Some parallels between the phenomenon reported here and the rate acceleration seen in sonochemistry are noted. The potential value of mass spectrometry in establishing conditions that enhance reaction rates is also indicated. It is possible that these observations will assist in the selection of reaction conditions involving the use of charged microdroplets to enhance the rates of ordinary bulk chemical reactions, especially those involving strong steric hindrance.
2’,7-Bis-O-(Triethylsilyl) 10-Desacetyl Paclitaxel
CHROMIUM(1+), DIFLUORO-
CEPHALOMANNINE
Methylium, cyano- (8CI,9CI)
Baccatine III